Gene : Pp3c1_22640 P. patens v3.3
Defline:  (1 of 1) PTHR10459:SF54 - POLY [ADP-RIBOSE] POLYMERASE 3 Genomic Order:  1058
Name:  ? Pp3c1_22640 Secondary Identifier:  ? PAC:32971758
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c1_22640 0.5kb upstream 0.5kb upstream 5717 true Chr01: 16765878-16771594 Physcomitrium patens
Pp3c1_22640 0.5kb upstream 0.5kb upstream 500 false Chr01: 16765878-16766377 Physcomitrium patens
Pp3c1_22640 0.5kb downstream 0.5kb downstream 5717 true Chr01: 16766378-16772094 Physcomitrium patens
Pp3c1_22640 0.5kb downstream 0.5kb downstream 500 false Chr01: 16771595-16772094 Physcomitrium patens
Pp3c1_22640 1.0kb upstream 1.0kb upstream 6217 true Chr01: 16765378-16771594 Physcomitrium patens
Pp3c1_22640 1.0kb upstream 1.0kb upstream 1000 false Chr01: 16765378-16766377 Physcomitrium patens
Pp3c1_22640 1.0kb downstream 1.0kb downstream 6217 true Chr01: 16766378-16772594 Physcomitrium patens
Pp3c1_22640 1.0kb downstream 1.0kb downstream 1000 false Chr01: 16771595-16772594 Physcomitrium patens
Pp3c1_22640 2.0kb upstream 2.0kb upstream 7217 true Chr01: 16764378-16771594 Physcomitrium patens
Pp3c1_22640 2.0kb upstream 2.0kb upstream 2000 false Chr01: 16764378-16766377 Physcomitrium patens
Pp3c1_22640 2.0kb downstream 2.0kb downstream 7217 true Chr01: 16766378-16773594 Physcomitrium patens
Pp3c1_22640 2.0kb downstream 2.0kb downstream 2000 false Chr01: 16771595-16773594 Physcomitrium patens
Pp3c1_22640 5.0kb upstream 5.0kb upstream 10217 true Chr01: 16761378-16771594 Physcomitrium patens
Pp3c1_22640 5.0kb upstream 5.0kb upstream 5000 false Chr01: 16761378-16766377 Physcomitrium patens
Pp3c1_22640 5.0kb downstream 5.0kb downstream 10217 true Chr01: 16766378-16776594 Physcomitrium patens
Pp3c1_22640 5.0kb downstream 5.0kb downstream 5000 false Chr01: 16771595-16776594 Physcomitrium patens
Pp3c1_22640 10.0kb upstream 10.0kb upstream 15217 true Chr01: 16756378-16771594 Physcomitrium patens
Pp3c1_22640 10.0kb upstream 10.0kb upstream 10000 false Chr01: 16756378-16766377 Physcomitrium patens
Pp3c1_22640 10.0kb downstream 10.0kb downstream 15217 true Chr01: 16766378-16781594 Physcomitrium patens
Pp3c1_22640 10.0kb downstream 10.0kb downstream 10000 false Chr01: 16771595-16781594 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348135 5274 Embryophyte View MSA
123380738 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.881        
cufflinks 0.549        
cufflinks 1.204        
cufflinks 0.325        
cufflinks 0.123        
cufflinks 472.107     High High
cufflinks 0.165        
cufflinks 9701.04     High High
cufflinks 459.626     High High
cufflinks 0.529        
cufflinks 383.318     High High
cufflinks 76.026     High  
cufflinks 0.075       Low
cufflinks 27.797     High  
cufflinks 0.388        
cufflinks 0.082       Low
cufflinks 2.128        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.141        
cufflinks 0.763        
cufflinks 0.076     Low Low
cufflinks 13.452        
cufflinks 1.613        
cufflinks 0.63        
cufflinks 0.286        
cufflinks 0.718        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.201        
cufflinks 52.391     High  

0 Strain