Gene : Pp3c18_13110 P. patens v3.3
Defline:  (1 of 3) PTHR23356:SF0 - DPY-30-LIKE 1-RELATED Genomic Order:  516
Name:  ? Pp3c18_13110 Secondary Identifier:  ? PAC:32981626
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c18_13110 0.5kb upstream 0.5kb upstream 3683 true Chr18: 9574013-9577695 Physcomitrium patens
Pp3c18_13110 0.5kb upstream 0.5kb upstream 500 false Chr18: 9574013-9574512 Physcomitrium patens
Pp3c18_13110 0.5kb downstream 0.5kb downstream 3683 true Chr18: 9574513-9578195 Physcomitrium patens
Pp3c18_13110 0.5kb downstream 0.5kb downstream 500 false Chr18: 9577696-9578195 Physcomitrium patens
Pp3c18_13110 1.0kb upstream 1.0kb upstream 4183 true Chr18: 9573513-9577695 Physcomitrium patens
Pp3c18_13110 1.0kb upstream 1.0kb upstream 1000 false Chr18: 9573513-9574512 Physcomitrium patens
Pp3c18_13110 1.0kb downstream 1.0kb downstream 4183 true Chr18: 9574513-9578695 Physcomitrium patens
Pp3c18_13110 1.0kb downstream 1.0kb downstream 1000 false Chr18: 9577696-9578695 Physcomitrium patens
Pp3c18_13110 2.0kb upstream 2.0kb upstream 5183 true Chr18: 9572513-9577695 Physcomitrium patens
Pp3c18_13110 2.0kb upstream 2.0kb upstream 2000 false Chr18: 9572513-9574512 Physcomitrium patens
Pp3c18_13110 2.0kb downstream 2.0kb downstream 5183 true Chr18: 9574513-9579695 Physcomitrium patens
Pp3c18_13110 2.0kb downstream 2.0kb downstream 2000 false Chr18: 9577696-9579695 Physcomitrium patens
Pp3c18_13110 5.0kb upstream 5.0kb upstream 8183 true Chr18: 9569513-9577695 Physcomitrium patens
Pp3c18_13110 5.0kb upstream 5.0kb upstream 5000 false Chr18: 9569513-9574512 Physcomitrium patens
Pp3c18_13110 5.0kb downstream 5.0kb downstream 8183 true Chr18: 9574513-9582695 Physcomitrium patens
Pp3c18_13110 5.0kb downstream 5.0kb downstream 5000 false Chr18: 9577696-9582695 Physcomitrium patens
Pp3c18_13110 10.0kb upstream 10.0kb upstream 13183 true Chr18: 9564513-9577695 Physcomitrium patens
Pp3c18_13110 10.0kb upstream 10.0kb upstream 10000 false Chr18: 9564513-9574512 Physcomitrium patens
Pp3c18_13110 10.0kb downstream 10.0kb downstream 13183 true Chr18: 9574513-9587695 Physcomitrium patens
Pp3c18_13110 10.0kb downstream 10.0kb downstream 10000 false Chr18: 9577696-9587695 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121335604 5274 Embryophyte Singleton cluster - no MSA
123372456 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.053     Low  
cufflinks 0.198       High
cufflinks 0.142        
cufflinks 0.038     Low  
cufflinks 0.15        
cufflinks 0.006     Low Low
cufflinks 0.039     Low  
cufflinks 0.062     Low  
cufflinks 0.195       High
cufflinks 0.144        
cufflinks 0.137        
cufflinks 0.178        
cufflinks 0.043     Low  
cufflinks 0.095        
cufflinks 0.204       High
cufflinks 0.029     Low  
cufflinks 0.21       High
cufflinks 0.152        
cufflinks 0.05     Low  
cufflinks 0.124        
cufflinks 0.088     Low  
cufflinks 0.016     Low Low
cufflinks 0.045     Low  
cufflinks 0.172        
cufflinks 0.138        
cufflinks 0.011     Low Low
cufflinks 0.044     Low  
cufflinks 0.154        
cufflinks 0.026     Low Low
cufflinks 0.031     Low  

0 Strain