Gene : Pp3c15_1630 P. patens v3.3
Defline:  (1 of 1) PF13863 - Domain of unknown function (DUF4200) (DUF4200) Genomic Order:  82
Name:  ? Pp3c15_1630 Secondary Identifier:  ? PAC:32928633
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c15_1630 0.5kb upstream 0.5kb upstream 7373 true Chr15: 924982-932354 Physcomitrium patens
Pp3c15_1630 0.5kb upstream 0.5kb upstream 500 false Chr15: 924982-925481 Physcomitrium patens
Pp3c15_1630 0.5kb downstream 0.5kb downstream 7373 true Chr15: 925482-932854 Physcomitrium patens
Pp3c15_1630 0.5kb downstream 0.5kb downstream 500 false Chr15: 932355-932854 Physcomitrium patens
Pp3c15_1630 1.0kb upstream 1.0kb upstream 7873 true Chr15: 924482-932354 Physcomitrium patens
Pp3c15_1630 1.0kb upstream 1.0kb upstream 1000 false Chr15: 924482-925481 Physcomitrium patens
Pp3c15_1630 1.0kb downstream 1.0kb downstream 7873 true Chr15: 925482-933354 Physcomitrium patens
Pp3c15_1630 1.0kb downstream 1.0kb downstream 1000 false Chr15: 932355-933354 Physcomitrium patens
Pp3c15_1630 2.0kb upstream 2.0kb upstream 8873 true Chr15: 923482-932354 Physcomitrium patens
Pp3c15_1630 2.0kb upstream 2.0kb upstream 2000 false Chr15: 923482-925481 Physcomitrium patens
Pp3c15_1630 2.0kb downstream 2.0kb downstream 8873 true Chr15: 925482-934354 Physcomitrium patens
Pp3c15_1630 2.0kb downstream 2.0kb downstream 2000 false Chr15: 932355-934354 Physcomitrium patens
Pp3c15_1630 5.0kb upstream 5.0kb upstream 11873 true Chr15: 920482-932354 Physcomitrium patens
Pp3c15_1630 5.0kb upstream 5.0kb upstream 5000 false Chr15: 920482-925481 Physcomitrium patens
Pp3c15_1630 5.0kb downstream 5.0kb downstream 11873 true Chr15: 925482-937354 Physcomitrium patens
Pp3c15_1630 5.0kb downstream 5.0kb downstream 5000 false Chr15: 932355-937354 Physcomitrium patens
Pp3c15_1630 10.0kb upstream 10.0kb upstream 16873 true Chr15: 915482-932354 Physcomitrium patens
Pp3c15_1630 10.0kb upstream 10.0kb upstream 10000 false Chr15: 915482-925481 Physcomitrium patens
Pp3c15_1630 10.0kb downstream 10.0kb downstream 16873 true Chr15: 925482-942354 Physcomitrium patens
Pp3c15_1630 10.0kb downstream 10.0kb downstream 10000 false Chr15: 932355-942354 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343160 5274 Embryophyte View MSA
123427102 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.832        
cufflinks 0.308       Low
cufflinks 0.572        
cufflinks 0.992        
cufflinks 1.628       High
cufflinks 0.307       Low
cufflinks 1.102        
cufflinks 0.722        
cufflinks 1.257        
cufflinks 1.977       High
cufflinks 0.684        
cufflinks 1.935       High
cufflinks 1.438        
cufflinks 0.686        
cufflinks 0.794        
cufflinks 0.965        
cufflinks 1.046        
cufflinks 1.226        
cufflinks 0.608        
cufflinks 4.369       High
cufflinks 0.706        
cufflinks 0.482        
cufflinks 0.746        
cufflinks 0.542        
cufflinks 0.332       Low
cufflinks 1.092        
cufflinks 0.724        
cufflinks 0.277       Low
cufflinks 0.611        
cufflinks 0.79        

0 Strain