Gene : Pp3c15_15330 P. patens v3.3
Genomic Order:  717 Name:  ? Pp3c15_15330
Secondary Identifier:  ? PAC:32927648
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c15_15330 0.5kb upstream 0.5kb upstream 8079 true Chr15: 10026973-10035051 Physcomitrium patens
Pp3c15_15330 0.5kb upstream 0.5kb upstream 500 false Chr15: 10034552-10035051 Physcomitrium patens
Pp3c15_15330 0.5kb downstream 0.5kb downstream 8079 true Chr15: 10026473-10034551 Physcomitrium patens
Pp3c15_15330 0.5kb downstream 0.5kb downstream 500 false Chr15: 10026473-10026972 Physcomitrium patens
Pp3c15_15330 1.0kb upstream 1.0kb upstream 8579 true Chr15: 10026973-10035551 Physcomitrium patens
Pp3c15_15330 1.0kb upstream 1.0kb upstream 1000 false Chr15: 10034552-10035551 Physcomitrium patens
Pp3c15_15330 1.0kb downstream 1.0kb downstream 8579 true Chr15: 10025973-10034551 Physcomitrium patens
Pp3c15_15330 1.0kb downstream 1.0kb downstream 1000 false Chr15: 10025973-10026972 Physcomitrium patens
Pp3c15_15330 2.0kb upstream 2.0kb upstream 9579 true Chr15: 10026973-10036551 Physcomitrium patens
Pp3c15_15330 2.0kb upstream 2.0kb upstream 2000 false Chr15: 10034552-10036551 Physcomitrium patens
Pp3c15_15330 2.0kb downstream 2.0kb downstream 9579 true Chr15: 10024973-10034551 Physcomitrium patens
Pp3c15_15330 2.0kb downstream 2.0kb downstream 2000 false Chr15: 10024973-10026972 Physcomitrium patens
Pp3c15_15330 5.0kb upstream 5.0kb upstream 12579 true Chr15: 10026973-10039551 Physcomitrium patens
Pp3c15_15330 5.0kb upstream 5.0kb upstream 5000 false Chr15: 10034552-10039551 Physcomitrium patens
Pp3c15_15330 5.0kb downstream 5.0kb downstream 12579 true Chr15: 10021973-10034551 Physcomitrium patens
Pp3c15_15330 5.0kb downstream 5.0kb downstream 5000 false Chr15: 10021973-10026972 Physcomitrium patens
Pp3c15_15330 10.0kb upstream 10.0kb upstream 17579 true Chr15: 10026973-10044551 Physcomitrium patens
Pp3c15_15330 10.0kb upstream 10.0kb upstream 10000 false Chr15: 10034552-10044551 Physcomitrium patens
Pp3c15_15330 10.0kb downstream 10.0kb downstream 17579 true Chr15: 10016973-10034551 Physcomitrium patens
Pp3c15_15330 10.0kb downstream 10.0kb downstream 10000 false Chr15: 10016973-10026972 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121346091 5274 Embryophyte View MSA
123380325 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.006     Low  
cufflinks 0.002     Low  
cufflinks 0.054       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.009     Low  
cufflinks 0.037     Low  
cufflinks 0.005     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.025     Low  
cufflinks 0.011     Low  
cufflinks 0.036     Low  
cufflinks 0.018     Low  
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  

0 Strain