Gene : Pp3c13_930 P. patens v3.3
Defline:  (1 of 25) PF06985 - Heterokaryon incompatibility protein (HET) (HET) Genomic Order:  24
Name:  ? Pp3c13_930 Secondary Identifier:  ? PAC:32929898
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c13_930 0.5kb upstream 0.5kb upstream 4041 true Chr13: 523382-527422 Physcomitrium patens
Pp3c13_930 0.5kb upstream 0.5kb upstream 500 false Chr13: 523382-523881 Physcomitrium patens
Pp3c13_930 0.5kb downstream 0.5kb downstream 4041 true Chr13: 523882-527922 Physcomitrium patens
Pp3c13_930 0.5kb downstream 0.5kb downstream 500 false Chr13: 527423-527922 Physcomitrium patens
Pp3c13_930 1.0kb upstream 1.0kb upstream 4541 true Chr13: 522882-527422 Physcomitrium patens
Pp3c13_930 1.0kb upstream 1.0kb upstream 1000 false Chr13: 522882-523881 Physcomitrium patens
Pp3c13_930 1.0kb downstream 1.0kb downstream 4541 true Chr13: 523882-528422 Physcomitrium patens
Pp3c13_930 1.0kb downstream 1.0kb downstream 1000 false Chr13: 527423-528422 Physcomitrium patens
Pp3c13_930 2.0kb upstream 2.0kb upstream 5541 true Chr13: 521882-527422 Physcomitrium patens
Pp3c13_930 2.0kb upstream 2.0kb upstream 2000 false Chr13: 521882-523881 Physcomitrium patens
Pp3c13_930 2.0kb downstream 2.0kb downstream 5541 true Chr13: 523882-529422 Physcomitrium patens
Pp3c13_930 2.0kb downstream 2.0kb downstream 2000 false Chr13: 527423-529422 Physcomitrium patens
Pp3c13_930 5.0kb upstream 5.0kb upstream 8541 true Chr13: 518882-527422 Physcomitrium patens
Pp3c13_930 5.0kb upstream 5.0kb upstream 5000 false Chr13: 518882-523881 Physcomitrium patens
Pp3c13_930 5.0kb downstream 5.0kb downstream 8541 true Chr13: 523882-532422 Physcomitrium patens
Pp3c13_930 5.0kb downstream 5.0kb downstream 5000 false Chr13: 527423-532422 Physcomitrium patens
Pp3c13_930 10.0kb upstream 10.0kb upstream 13541 true Chr13: 513882-527422 Physcomitrium patens
Pp3c13_930 10.0kb upstream 10.0kb upstream 10000 false Chr13: 513882-523881 Physcomitrium patens
Pp3c13_930 10.0kb downstream 10.0kb downstream 13541 true Chr13: 523882-537422 Physcomitrium patens
Pp3c13_930 10.0kb downstream 10.0kb downstream 10000 false Chr13: 527423-537422 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121337069 5274 Embryophyte View MSA
123373869 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.048     Low Low
cufflinks 0.188        
cufflinks 0.041     Low Low
cufflinks 0.185        
cufflinks 0.251        
cufflinks 0.259        
cufflinks 0.498       High
cufflinks 0.157        
cufflinks 0.005     Low Low
cufflinks 0.246        
cufflinks 0.118        
cufflinks 0.08        
cufflinks 0.245        
cufflinks 0.349        
cufflinks 0.264        
cufflinks 0.324        
cufflinks 0.464       High
cufflinks 0.468       High
cufflinks 0.406        
cufflinks 0.201        
cufflinks 0.323        
cufflinks 0.083     Low  
cufflinks 0.265        
cufflinks 0.195        
cufflinks 0.206        
cufflinks 0.217        
cufflinks 0.048     Low Low
cufflinks 0.132        
cufflinks 0.009     Low Low
cufflinks 0.195        

0 Strain