Gene : Pp3c13_670 P. patens v3.3
Defline:  (1 of 4) PTHR24148:SF6 - ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39 HOMOLOG Genomic Order:  18
Name:  ? Pp3c13_670 Secondary Identifier:  ? PAC:32930518
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c13_670 0.5kb upstream 0.5kb upstream 9378 true Chr13: 380552-389929 Physcomitrium patens
Pp3c13_670 0.5kb upstream 0.5kb upstream 500 false Chr13: 389430-389929 Physcomitrium patens
Pp3c13_670 0.5kb downstream 0.5kb downstream 9378 true Chr13: 380052-389429 Physcomitrium patens
Pp3c13_670 0.5kb downstream 0.5kb downstream 500 false Chr13: 380052-380551 Physcomitrium patens
Pp3c13_670 1.0kb upstream 1.0kb upstream 9878 true Chr13: 380552-390429 Physcomitrium patens
Pp3c13_670 1.0kb upstream 1.0kb upstream 1000 false Chr13: 389430-390429 Physcomitrium patens
Pp3c13_670 1.0kb downstream 1.0kb downstream 9878 true Chr13: 379552-389429 Physcomitrium patens
Pp3c13_670 1.0kb downstream 1.0kb downstream 1000 false Chr13: 379552-380551 Physcomitrium patens
Pp3c13_670 2.0kb upstream 2.0kb upstream 10878 true Chr13: 380552-391429 Physcomitrium patens
Pp3c13_670 2.0kb upstream 2.0kb upstream 2000 false Chr13: 389430-391429 Physcomitrium patens
Pp3c13_670 2.0kb downstream 2.0kb downstream 10878 true Chr13: 378552-389429 Physcomitrium patens
Pp3c13_670 2.0kb downstream 2.0kb downstream 2000 false Chr13: 378552-380551 Physcomitrium patens
Pp3c13_670 5.0kb upstream 5.0kb upstream 13878 true Chr13: 380552-394429 Physcomitrium patens
Pp3c13_670 5.0kb upstream 5.0kb upstream 5000 false Chr13: 389430-394429 Physcomitrium patens
Pp3c13_670 5.0kb downstream 5.0kb downstream 13878 true Chr13: 375552-389429 Physcomitrium patens
Pp3c13_670 5.0kb downstream 5.0kb downstream 5000 false Chr13: 375552-380551 Physcomitrium patens
Pp3c13_670 10.0kb upstream 10.0kb upstream 18878 true Chr13: 380552-399429 Physcomitrium patens
Pp3c13_670 10.0kb upstream 10.0kb upstream 10000 false Chr13: 389430-399429 Physcomitrium patens
Pp3c13_670 10.0kb downstream 10.0kb downstream 18878 true Chr13: 370552-389429 Physcomitrium patens
Pp3c13_670 10.0kb downstream 10.0kb downstream 10000 false Chr13: 370552-380551 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121337069 5274 Embryophyte View MSA
123373869 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.584        
cufflinks 0.45        
cufflinks 0.868        
cufflinks 0.923        
cufflinks 0.757        
cufflinks 1.09       High
cufflinks 0.965        
cufflinks 1.215       High
cufflinks 1.012        
cufflinks 0.467        
cufflinks 0.656        
cufflinks 0.549        
cufflinks 0.87        
cufflinks 0.854        
cufflinks 0.225       Low
cufflinks 0.973        
cufflinks 0.736        
cufflinks 0.428       Low
cufflinks 0.509        
cufflinks 0.473        
cufflinks 1.263       High
cufflinks 0.824        
cufflinks 0.759        
cufflinks 1.106       High
cufflinks 0.331       Low
cufflinks 1.002        
cufflinks 0.268       Low
cufflinks 0.858        
cufflinks 0.532        
cufflinks 0.918        

0 Strain