Gene : Bradi3g58620 B. distachyon v3.1
Defline:  (1 of 1) PTHR31279:SF3 - (PHI-1) PROTEIN, PUTATIVE-RELATED Genomic Order:  7266
Name:  ? Bradi3g58620 Secondary Identifier:  ? PAC:32823594
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g58620 0.5kb upstream 0.5kb upstream 1698 true Bd3: 57842219-57843916 Brachypodium distachyon
Bradi3g58620 0.5kb upstream 0.5kb upstream 500 false Bd3: 57843417-57843916 Brachypodium distachyon
Bradi3g58620 0.5kb downstream 0.5kb downstream 1698 true Bd3: 57841719-57843416 Brachypodium distachyon
Bradi3g58620 0.5kb downstream 0.5kb downstream 500 false Bd3: 57841719-57842218 Brachypodium distachyon
Bradi3g58620 1.0kb upstream 1.0kb upstream 2198 true Bd3: 57842219-57844416 Brachypodium distachyon
Bradi3g58620 1.0kb upstream 1.0kb upstream 1000 false Bd3: 57843417-57844416 Brachypodium distachyon
Bradi3g58620 1.0kb downstream 1.0kb downstream 2198 true Bd3: 57841219-57843416 Brachypodium distachyon
Bradi3g58620 1.0kb downstream 1.0kb downstream 1000 false Bd3: 57841219-57842218 Brachypodium distachyon
Bradi3g58620 2.0kb upstream 2.0kb upstream 3198 true Bd3: 57842219-57845416 Brachypodium distachyon
Bradi3g58620 2.0kb upstream 2.0kb upstream 2000 false Bd3: 57843417-57845416 Brachypodium distachyon
Bradi3g58620 2.0kb downstream 2.0kb downstream 3198 true Bd3: 57840219-57843416 Brachypodium distachyon
Bradi3g58620 2.0kb downstream 2.0kb downstream 2000 false Bd3: 57840219-57842218 Brachypodium distachyon
Bradi3g58620 5.0kb upstream 5.0kb upstream 6198 true Bd3: 57842219-57848416 Brachypodium distachyon
Bradi3g58620 5.0kb upstream 5.0kb upstream 5000 false Bd3: 57843417-57848416 Brachypodium distachyon
Bradi3g58620 5.0kb downstream 5.0kb downstream 6198 true Bd3: 57837219-57843416 Brachypodium distachyon
Bradi3g58620 5.0kb downstream 5.0kb downstream 5000 false Bd3: 57837219-57842218 Brachypodium distachyon
Bradi3g58620 10.0kb upstream 10.0kb upstream 11198 true Bd3: 57842219-57853416 Brachypodium distachyon
Bradi3g58620 10.0kb upstream 10.0kb upstream 10000 false Bd3: 57843417-57853416 Brachypodium distachyon
Bradi3g58620 10.0kb downstream 10.0kb downstream 11198 true Bd3: 57832219-57843416 Brachypodium distachyon
Bradi3g58620 10.0kb downstream 10.0kb downstream 10000 false Bd3: 57832219-57842218 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572073 5269 Grass View MSA
122046837 5273 Angiosperm View MSA
121351467 5274 Embryophyte View MSA
123382178 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.469     High  
cufflinks 12.598     High  
cufflinks 12.043     High  
cufflinks 11.942     High  
cufflinks 0.801       Low
cufflinks 11.683     High  
cufflinks 12.819     High  
cufflinks 7.495        
cufflinks 7.147        
cufflinks 7.435        
cufflinks 0.248       Low
cufflinks 11.781     High  
cufflinks 1.083        
cufflinks 0.055     Low Low
cufflinks 13.508     High  
cufflinks 33.622     High High
cufflinks 13.627     High  
cufflinks 12.516     High  
cufflinks 13.661     High  
cufflinks 1.967        
cufflinks 14.332     High  
cufflinks 7.783        
cufflinks 10.915     High  
cufflinks 9.012        
cufflinks 9.102        
cufflinks 7.98        
cufflinks 0.02     Low Low
cufflinks 12.756     High  
cufflinks 12.841     High  
cufflinks 19.19     High  

0 Strain