Gene : Bradi3g45740 B. distachyon v3.1
Defline:  (1 of 1) PTHR22870//PTHR22870:SF193 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED Genomic Order:  5673
Name:  ? Bradi3g45740 Secondary Identifier:  ? PAC:32820017
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g45740 0.5kb upstream 0.5kb upstream 4860 true Bd3: 47490424-47495283 Brachypodium distachyon
Bradi3g45740 0.5kb upstream 0.5kb upstream 500 false Bd3: 47490424-47490923 Brachypodium distachyon
Bradi3g45740 0.5kb downstream 0.5kb downstream 4860 true Bd3: 47490924-47495783 Brachypodium distachyon
Bradi3g45740 0.5kb downstream 0.5kb downstream 500 false Bd3: 47495284-47495783 Brachypodium distachyon
Bradi3g45740 1.0kb upstream 1.0kb upstream 5360 true Bd3: 47489924-47495283 Brachypodium distachyon
Bradi3g45740 1.0kb upstream 1.0kb upstream 1000 false Bd3: 47489924-47490923 Brachypodium distachyon
Bradi3g45740 1.0kb downstream 1.0kb downstream 5360 true Bd3: 47490924-47496283 Brachypodium distachyon
Bradi3g45740 1.0kb downstream 1.0kb downstream 1000 false Bd3: 47495284-47496283 Brachypodium distachyon
Bradi3g45740 2.0kb upstream 2.0kb upstream 6360 true Bd3: 47488924-47495283 Brachypodium distachyon
Bradi3g45740 2.0kb upstream 2.0kb upstream 2000 false Bd3: 47488924-47490923 Brachypodium distachyon
Bradi3g45740 2.0kb downstream 2.0kb downstream 6360 true Bd3: 47490924-47497283 Brachypodium distachyon
Bradi3g45740 2.0kb downstream 2.0kb downstream 2000 false Bd3: 47495284-47497283 Brachypodium distachyon
Bradi3g45740 5.0kb upstream 5.0kb upstream 9360 true Bd3: 47485924-47495283 Brachypodium distachyon
Bradi3g45740 5.0kb upstream 5.0kb upstream 5000 false Bd3: 47485924-47490923 Brachypodium distachyon
Bradi3g45740 5.0kb downstream 5.0kb downstream 9360 true Bd3: 47490924-47500283 Brachypodium distachyon
Bradi3g45740 5.0kb downstream 5.0kb downstream 5000 false Bd3: 47495284-47500283 Brachypodium distachyon
Bradi3g45740 10.0kb upstream 10.0kb upstream 14360 true Bd3: 47480924-47495283 Brachypodium distachyon
Bradi3g45740 10.0kb upstream 10.0kb upstream 10000 false Bd3: 47480924-47490923 Brachypodium distachyon
Bradi3g45740 10.0kb downstream 10.0kb downstream 14360 true Bd3: 47490924-47505283 Brachypodium distachyon
Bradi3g45740 10.0kb downstream 10.0kb downstream 10000 false Bd3: 47495284-47505283 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124567873 5269 Grass View MSA
122046022 5273 Angiosperm View MSA
121348497 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.044        
cufflinks 0.821        
cufflinks 0.967        
cufflinks 1.026        
cufflinks 1.131        
cufflinks 0.827        
cufflinks 0.907        
cufflinks 0.744        
cufflinks 0.929        
cufflinks 0.542        
cufflinks 0.003     Low Low
cufflinks 0.887        
cufflinks 0.067       Low
cufflinks 0.004     Low Low
cufflinks 0.454        
cufflinks 0.595        
cufflinks 0.818        
cufflinks 1.368        
cufflinks 1.106        
cufflinks 0.755        
cufflinks 1.537        
cufflinks 0.817        
cufflinks 0.852        
cufflinks 0.887        
cufflinks 0.986        
cufflinks 0.899        
cufflinks 0.002     Low Low
cufflinks 0.753        
cufflinks 0.834        
cufflinks 2.545        

0 Strain