Gene : Bradi3g29210 B. distachyon v3.1
Defline:  (1 of 1) PTHR11751//PTHR11751:SF388 - SUBGROUP I AMINOTRANSFERASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  3515
Name:  ? Bradi3g29210 Secondary Identifier:  ? PAC:32818477
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g29210 0.5kb upstream 0.5kb upstream 3203 true Bd3: 30844454-30847656 Brachypodium distachyon
Bradi3g29210 0.5kb upstream 0.5kb upstream 500 false Bd3: 30847157-30847656 Brachypodium distachyon
Bradi3g29210 0.5kb downstream 0.5kb downstream 3203 true Bd3: 30843954-30847156 Brachypodium distachyon
Bradi3g29210 0.5kb downstream 0.5kb downstream 500 false Bd3: 30843954-30844453 Brachypodium distachyon
Bradi3g29210 1.0kb upstream 1.0kb upstream 3703 true Bd3: 30844454-30848156 Brachypodium distachyon
Bradi3g29210 1.0kb upstream 1.0kb upstream 1000 false Bd3: 30847157-30848156 Brachypodium distachyon
Bradi3g29210 1.0kb downstream 1.0kb downstream 3703 true Bd3: 30843454-30847156 Brachypodium distachyon
Bradi3g29210 1.0kb downstream 1.0kb downstream 1000 false Bd3: 30843454-30844453 Brachypodium distachyon
Bradi3g29210 2.0kb upstream 2.0kb upstream 4703 true Bd3: 30844454-30849156 Brachypodium distachyon
Bradi3g29210 2.0kb upstream 2.0kb upstream 2000 false Bd3: 30847157-30849156 Brachypodium distachyon
Bradi3g29210 2.0kb downstream 2.0kb downstream 4703 true Bd3: 30842454-30847156 Brachypodium distachyon
Bradi3g29210 2.0kb downstream 2.0kb downstream 2000 false Bd3: 30842454-30844453 Brachypodium distachyon
Bradi3g29210 5.0kb upstream 5.0kb upstream 7703 true Bd3: 30844454-30852156 Brachypodium distachyon
Bradi3g29210 5.0kb upstream 5.0kb upstream 5000 false Bd3: 30847157-30852156 Brachypodium distachyon
Bradi3g29210 5.0kb downstream 5.0kb downstream 7703 true Bd3: 30839454-30847156 Brachypodium distachyon
Bradi3g29210 5.0kb downstream 5.0kb downstream 5000 false Bd3: 30839454-30844453 Brachypodium distachyon
Bradi3g29210 10.0kb upstream 10.0kb upstream 12703 true Bd3: 30844454-30857156 Brachypodium distachyon
Bradi3g29210 10.0kb upstream 10.0kb upstream 10000 false Bd3: 30847157-30857156 Brachypodium distachyon
Bradi3g29210 10.0kb downstream 10.0kb downstream 12703 true Bd3: 30834454-30847156 Brachypodium distachyon
Bradi3g29210 10.0kb downstream 10.0kb downstream 10000 false Bd3: 30834454-30844453 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574780 5269 Grass View MSA
122049286 5273 Angiosperm View MSA
121348789 5274 Embryophyte View MSA
123381015 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.893        
cufflinks 2.343       High
cufflinks 3.04       High
cufflinks 2.111        
cufflinks 0.56       Low
cufflinks 1.776        
cufflinks 2.085        
cufflinks 1.536        
cufflinks 1.54        
cufflinks 2.324        
cufflinks 1.584        
cufflinks 1.453        
cufflinks 0.896        
cufflinks 1.104        
cufflinks 0.741        
cufflinks 2.243        
cufflinks 0.987        
cufflinks 0.458       Low
cufflinks 0.893        
cufflinks 0.256       Low
cufflinks 1.016        
cufflinks 2.516       High
cufflinks 1.141        
cufflinks 1.177        
cufflinks 1.66        
cufflinks 3.031       High
cufflinks 0.637        
cufflinks 2.938       High
cufflinks 2.677       High
cufflinks 1.592        

0 Strain