Gene : Bradi3g07580 B. distachyon v3.1
Defline:  (1 of 1) PTHR19851:SF7 - PROTEIN K06A9.2 Genomic Order:  960
Name:  ? Bradi3g07580 Secondary Identifier:  ? PAC:32823560
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g07580 0.5kb upstream 0.5kb upstream 4978 true Bd3: 5735456-5740433 Brachypodium distachyon
Bradi3g07580 0.5kb upstream 0.5kb upstream 500 false Bd3: 5739934-5740433 Brachypodium distachyon
Bradi3g07580 0.5kb downstream 0.5kb downstream 4978 true Bd3: 5734956-5739933 Brachypodium distachyon
Bradi3g07580 0.5kb downstream 0.5kb downstream 500 false Bd3: 5734956-5735455 Brachypodium distachyon
Bradi3g07580 1.0kb upstream 1.0kb upstream 5478 true Bd3: 5735456-5740933 Brachypodium distachyon
Bradi3g07580 1.0kb upstream 1.0kb upstream 1000 false Bd3: 5739934-5740933 Brachypodium distachyon
Bradi3g07580 1.0kb downstream 1.0kb downstream 5478 true Bd3: 5734456-5739933 Brachypodium distachyon
Bradi3g07580 1.0kb downstream 1.0kb downstream 1000 false Bd3: 5734456-5735455 Brachypodium distachyon
Bradi3g07580 2.0kb upstream 2.0kb upstream 6478 true Bd3: 5735456-5741933 Brachypodium distachyon
Bradi3g07580 2.0kb upstream 2.0kb upstream 2000 false Bd3: 5739934-5741933 Brachypodium distachyon
Bradi3g07580 2.0kb downstream 2.0kb downstream 6478 true Bd3: 5733456-5739933 Brachypodium distachyon
Bradi3g07580 2.0kb downstream 2.0kb downstream 2000 false Bd3: 5733456-5735455 Brachypodium distachyon
Bradi3g07580 5.0kb upstream 5.0kb upstream 9478 true Bd3: 5735456-5744933 Brachypodium distachyon
Bradi3g07580 5.0kb upstream 5.0kb upstream 5000 false Bd3: 5739934-5744933 Brachypodium distachyon
Bradi3g07580 5.0kb downstream 5.0kb downstream 9478 true Bd3: 5730456-5739933 Brachypodium distachyon
Bradi3g07580 5.0kb downstream 5.0kb downstream 5000 false Bd3: 5730456-5735455 Brachypodium distachyon
Bradi3g07580 10.0kb upstream 10.0kb upstream 14478 true Bd3: 5735456-5749933 Brachypodium distachyon
Bradi3g07580 10.0kb upstream 10.0kb upstream 10000 false Bd3: 5739934-5749933 Brachypodium distachyon
Bradi3g07580 10.0kb downstream 10.0kb downstream 14478 true Bd3: 5725456-5739933 Brachypodium distachyon
Bradi3g07580 10.0kb downstream 10.0kb downstream 10000 false Bd3: 5725456-5735455 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572713 5269 Grass View MSA
122049058 5273 Angiosperm View MSA
121311228 5274 Embryophyte View MSA
123348552 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.337        
cufflinks 0.796       High
cufflinks 0.484        
cufflinks 0.536        
cufflinks 0.245        
cufflinks 0.718        
cufflinks 0.683        
cufflinks 0.295        
cufflinks 0.409        
cufflinks 0.263        
cufflinks 0.632        
cufflinks 0.662        
cufflinks 0.468        
cufflinks 0.31        
cufflinks 0.37        
cufflinks 0.452        
cufflinks 0.287        
cufflinks 1.589       High
cufflinks 1.016       High
cufflinks 0.137     Low Low
cufflinks 0.503        
cufflinks 0.355        
cufflinks 0.271        
cufflinks 0.39        
cufflinks 0.45        
cufflinks 0.424        
cufflinks 0.683        
cufflinks 0.403        
cufflinks 0.358        
cufflinks 0.584        

0 Strain