Gene : Bradi2g57360 B. distachyon v3.1
Defline:  (1 of 1) PTHR13408//PTHR13408:SF4 - DNA-DIRECTED RNA POLYMERASE III // SUBFAMILY NOT NAMED Genomic Order:  6907
Name:  ? Bradi2g57360 Secondary Identifier:  ? PAC:32782574
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g57360 0.5kb upstream 0.5kb upstream 3513 true Bd2: 55332629-55336141 Brachypodium distachyon
Bradi2g57360 0.5kb upstream 0.5kb upstream 500 false Bd2: 55335642-55336141 Brachypodium distachyon
Bradi2g57360 0.5kb downstream 0.5kb downstream 3513 true Bd2: 55332129-55335641 Brachypodium distachyon
Bradi2g57360 0.5kb downstream 0.5kb downstream 500 false Bd2: 55332129-55332628 Brachypodium distachyon
Bradi2g57360 1.0kb upstream 1.0kb upstream 4013 true Bd2: 55332629-55336641 Brachypodium distachyon
Bradi2g57360 1.0kb upstream 1.0kb upstream 1000 false Bd2: 55335642-55336641 Brachypodium distachyon
Bradi2g57360 1.0kb downstream 1.0kb downstream 4013 true Bd2: 55331629-55335641 Brachypodium distachyon
Bradi2g57360 1.0kb downstream 1.0kb downstream 1000 false Bd2: 55331629-55332628 Brachypodium distachyon
Bradi2g57360 2.0kb upstream 2.0kb upstream 5013 true Bd2: 55332629-55337641 Brachypodium distachyon
Bradi2g57360 2.0kb upstream 2.0kb upstream 2000 false Bd2: 55335642-55337641 Brachypodium distachyon
Bradi2g57360 2.0kb downstream 2.0kb downstream 5013 true Bd2: 55330629-55335641 Brachypodium distachyon
Bradi2g57360 2.0kb downstream 2.0kb downstream 2000 false Bd2: 55330629-55332628 Brachypodium distachyon
Bradi2g57360 5.0kb upstream 5.0kb upstream 8013 true Bd2: 55332629-55340641 Brachypodium distachyon
Bradi2g57360 5.0kb upstream 5.0kb upstream 5000 false Bd2: 55335642-55340641 Brachypodium distachyon
Bradi2g57360 5.0kb downstream 5.0kb downstream 8013 true Bd2: 55327629-55335641 Brachypodium distachyon
Bradi2g57360 5.0kb downstream 5.0kb downstream 5000 false Bd2: 55327629-55332628 Brachypodium distachyon
Bradi2g57360 10.0kb upstream 10.0kb upstream 13013 true Bd2: 55332629-55345641 Brachypodium distachyon
Bradi2g57360 10.0kb upstream 10.0kb upstream 10000 false Bd2: 55335642-55345641 Brachypodium distachyon
Bradi2g57360 10.0kb downstream 10.0kb downstream 13013 true Bd2: 55322629-55335641 Brachypodium distachyon
Bradi2g57360 10.0kb downstream 10.0kb downstream 10000 false Bd2: 55322629-55332628 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581015 5269 Grass View MSA
122050279 5273 Angiosperm View MSA
121344817 5274 Embryophyte View MSA
123427691 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.447        
cufflinks 4.608        
cufflinks 5.788        
cufflinks 6.651        
cufflinks 4.093        
cufflinks 4.142        
cufflinks 4.023        
cufflinks 4.538        
cufflinks 4.645        
cufflinks 8.073       High
cufflinks 8.674     High High
cufflinks 4.507        
cufflinks 5.083        
cufflinks 6.602        
cufflinks 5.678        
cufflinks 3.717        
cufflinks 4.687        
cufflinks 2.865       Low
cufflinks 2.658       Low
cufflinks 3.602        
cufflinks 5.651        
cufflinks 5.4        
cufflinks 4.625        
cufflinks 4.523        
cufflinks 5.041        
cufflinks 9.4       High
cufflinks 8.769       High
cufflinks 7.775       High
cufflinks 6.318        
cufflinks 4.039        

0 Strain