Gene : Bradi2g52540 B. distachyon v3.1
Defline:  (1 of 1) K01142 - exodeoxyribonuclease III (E3.1.11.2, xthA) Genomic Order:  6315
Name:  ? Bradi2g52540 Secondary Identifier:  ? PAC:32772486
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g52540 0.5kb upstream 0.5kb upstream 11214 true Bd2: 51664198-51675411 Brachypodium distachyon
Bradi2g52540 0.5kb upstream 0.5kb upstream 500 false Bd2: 51664198-51664697 Brachypodium distachyon
Bradi2g52540 0.5kb downstream 0.5kb downstream 11214 true Bd2: 51664698-51675911 Brachypodium distachyon
Bradi2g52540 0.5kb downstream 0.5kb downstream 500 false Bd2: 51675412-51675911 Brachypodium distachyon
Bradi2g52540 1.0kb upstream 1.0kb upstream 11714 true Bd2: 51663698-51675411 Brachypodium distachyon
Bradi2g52540 1.0kb upstream 1.0kb upstream 1000 false Bd2: 51663698-51664697 Brachypodium distachyon
Bradi2g52540 1.0kb downstream 1.0kb downstream 11714 true Bd2: 51664698-51676411 Brachypodium distachyon
Bradi2g52540 1.0kb downstream 1.0kb downstream 1000 false Bd2: 51675412-51676411 Brachypodium distachyon
Bradi2g52540 2.0kb upstream 2.0kb upstream 12714 true Bd2: 51662698-51675411 Brachypodium distachyon
Bradi2g52540 2.0kb upstream 2.0kb upstream 2000 false Bd2: 51662698-51664697 Brachypodium distachyon
Bradi2g52540 2.0kb downstream 2.0kb downstream 12714 true Bd2: 51664698-51677411 Brachypodium distachyon
Bradi2g52540 2.0kb downstream 2.0kb downstream 2000 false Bd2: 51675412-51677411 Brachypodium distachyon
Bradi2g52540 5.0kb upstream 5.0kb upstream 15714 true Bd2: 51659698-51675411 Brachypodium distachyon
Bradi2g52540 5.0kb upstream 5.0kb upstream 5000 false Bd2: 51659698-51664697 Brachypodium distachyon
Bradi2g52540 5.0kb downstream 5.0kb downstream 15714 true Bd2: 51664698-51680411 Brachypodium distachyon
Bradi2g52540 5.0kb downstream 5.0kb downstream 5000 false Bd2: 51675412-51680411 Brachypodium distachyon
Bradi2g52540 10.0kb upstream 10.0kb upstream 20714 true Bd2: 51654698-51675411 Brachypodium distachyon
Bradi2g52540 10.0kb upstream 10.0kb upstream 10000 false Bd2: 51654698-51664697 Brachypodium distachyon
Bradi2g52540 10.0kb downstream 10.0kb downstream 20714 true Bd2: 51664698-51685411 Brachypodium distachyon
Bradi2g52540 10.0kb downstream 10.0kb downstream 10000 false Bd2: 51675412-51685411 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586073 5269 Grass View MSA
122048084 5273 Angiosperm View MSA
121344358 5274 Embryophyte View MSA
123426911 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.34        
cufflinks 2.282        
cufflinks 2.146        
cufflinks 2.219        
cufflinks 0.964        
cufflinks 2.154        
cufflinks 1.857        
cufflinks 2.266        
cufflinks 2.207        
cufflinks 1.346        
cufflinks 1.73        
cufflinks 2.054        
cufflinks 1.785        
cufflinks 1.897        
cufflinks 1.67        
cufflinks 2.106        
cufflinks 1.387        
cufflinks 1.481        
cufflinks 0.993        
cufflinks 0.119     Low Low
cufflinks 1.215        
cufflinks 1.89        
cufflinks 2.233        
cufflinks 2.043        
cufflinks 2.097        
cufflinks 1.815        
cufflinks 2.246        
cufflinks 1.804        
cufflinks 1.868        
cufflinks 1.717        

0 Strain