Gene : Bradi2g16970 B. distachyon v3.1
Defline:  (1 of 1) PTHR21349:SF0 - 39S RIBOSOMAL PROTEIN L21, MITOCHONDRIAL Genomic Order:  2160
Name:  ? Bradi2g16970 Secondary Identifier:  ? PAC:32775275
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g16970 0.5kb upstream 0.5kb upstream 7712 true Bd2: 14973773-14981484 Brachypodium distachyon
Bradi2g16970 0.5kb upstream 0.5kb upstream 500 false Bd2: 14980985-14981484 Brachypodium distachyon
Bradi2g16970 0.5kb downstream 0.5kb downstream 7712 true Bd2: 14973273-14980984 Brachypodium distachyon
Bradi2g16970 0.5kb downstream 0.5kb downstream 500 false Bd2: 14973273-14973772 Brachypodium distachyon
Bradi2g16970 1.0kb upstream 1.0kb upstream 8212 true Bd2: 14973773-14981984 Brachypodium distachyon
Bradi2g16970 1.0kb upstream 1.0kb upstream 1000 false Bd2: 14980985-14981984 Brachypodium distachyon
Bradi2g16970 1.0kb downstream 1.0kb downstream 8212 true Bd2: 14972773-14980984 Brachypodium distachyon
Bradi2g16970 1.0kb downstream 1.0kb downstream 1000 false Bd2: 14972773-14973772 Brachypodium distachyon
Bradi2g16970 2.0kb upstream 2.0kb upstream 9212 true Bd2: 14973773-14982984 Brachypodium distachyon
Bradi2g16970 2.0kb upstream 2.0kb upstream 2000 false Bd2: 14980985-14982984 Brachypodium distachyon
Bradi2g16970 2.0kb downstream 2.0kb downstream 9212 true Bd2: 14971773-14980984 Brachypodium distachyon
Bradi2g16970 2.0kb downstream 2.0kb downstream 2000 false Bd2: 14971773-14973772 Brachypodium distachyon
Bradi2g16970 5.0kb upstream 5.0kb upstream 12212 true Bd2: 14973773-14985984 Brachypodium distachyon
Bradi2g16970 5.0kb upstream 5.0kb upstream 5000 false Bd2: 14980985-14985984 Brachypodium distachyon
Bradi2g16970 5.0kb downstream 5.0kb downstream 12212 true Bd2: 14968773-14980984 Brachypodium distachyon
Bradi2g16970 5.0kb downstream 5.0kb downstream 5000 false Bd2: 14968773-14973772 Brachypodium distachyon
Bradi2g16970 10.0kb upstream 10.0kb upstream 17212 true Bd2: 14973773-14990984 Brachypodium distachyon
Bradi2g16970 10.0kb upstream 10.0kb upstream 10000 false Bd2: 14980985-14990984 Brachypodium distachyon
Bradi2g16970 10.0kb downstream 10.0kb downstream 17212 true Bd2: 14963773-14980984 Brachypodium distachyon
Bradi2g16970 10.0kb downstream 10.0kb downstream 10000 false Bd2: 14963773-14973772 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576451 5269 Grass View MSA
122045710 5273 Angiosperm View MSA
121350514 5274 Embryophyte View MSA
123424430 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.318        
cufflinks 0.428        
cufflinks 0.335        
cufflinks 0.389        
cufflinks 0.13       Low
cufflinks 0.349        
cufflinks 0.383        
cufflinks 0.268        
cufflinks 0.281        
cufflinks 0.254        
cufflinks 0.243        
cufflinks 0.202        
cufflinks 0.113       Low
cufflinks 0.135       Low
cufflinks 0.096       Low
cufflinks 0.431        
cufflinks 0.361        
cufflinks 0.811       High
cufflinks 0.351        
cufflinks 0.036     Low Low
cufflinks 0.46        
cufflinks 0.246        
cufflinks 0.208        
cufflinks 0.246        
cufflinks 0.382        
cufflinks 0.298        
cufflinks 0.164        
cufflinks 0.304        
cufflinks 0.273        
cufflinks 0.411        

0 Strain