Gene : Bradi2g09920 B. distachyon v3.1
Defline:  (1 of 86) PF08387 - FBD (FBD) Genomic Order:  1275
Name:  ? Bradi2g09920 Secondary Identifier:  ? PAC:32778893
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g09920 0.5kb upstream 0.5kb upstream 2671 true Bd2: 8114899-8117569 Brachypodium distachyon
Bradi2g09920 0.5kb upstream 0.5kb upstream 500 false Bd2: 8117070-8117569 Brachypodium distachyon
Bradi2g09920 0.5kb downstream 0.5kb downstream 2671 true Bd2: 8114399-8117069 Brachypodium distachyon
Bradi2g09920 0.5kb downstream 0.5kb downstream 500 false Bd2: 8114399-8114898 Brachypodium distachyon
Bradi2g09920 1.0kb upstream 1.0kb upstream 3171 true Bd2: 8114899-8118069 Brachypodium distachyon
Bradi2g09920 1.0kb upstream 1.0kb upstream 1000 false Bd2: 8117070-8118069 Brachypodium distachyon
Bradi2g09920 1.0kb downstream 1.0kb downstream 3171 true Bd2: 8113899-8117069 Brachypodium distachyon
Bradi2g09920 1.0kb downstream 1.0kb downstream 1000 false Bd2: 8113899-8114898 Brachypodium distachyon
Bradi2g09920 2.0kb upstream 2.0kb upstream 4171 true Bd2: 8114899-8119069 Brachypodium distachyon
Bradi2g09920 2.0kb upstream 2.0kb upstream 2000 false Bd2: 8117070-8119069 Brachypodium distachyon
Bradi2g09920 2.0kb downstream 2.0kb downstream 4171 true Bd2: 8112899-8117069 Brachypodium distachyon
Bradi2g09920 2.0kb downstream 2.0kb downstream 2000 false Bd2: 8112899-8114898 Brachypodium distachyon
Bradi2g09920 5.0kb upstream 5.0kb upstream 7171 true Bd2: 8114899-8122069 Brachypodium distachyon
Bradi2g09920 5.0kb upstream 5.0kb upstream 5000 false Bd2: 8117070-8122069 Brachypodium distachyon
Bradi2g09920 5.0kb downstream 5.0kb downstream 7171 true Bd2: 8109899-8117069 Brachypodium distachyon
Bradi2g09920 5.0kb downstream 5.0kb downstream 5000 false Bd2: 8109899-8114898 Brachypodium distachyon
Bradi2g09920 10.0kb upstream 10.0kb upstream 12171 true Bd2: 8114899-8127069 Brachypodium distachyon
Bradi2g09920 10.0kb upstream 10.0kb upstream 10000 false Bd2: 8117070-8127069 Brachypodium distachyon
Bradi2g09920 10.0kb downstream 10.0kb downstream 12171 true Bd2: 8104899-8117069 Brachypodium distachyon
Bradi2g09920 10.0kb downstream 10.0kb downstream 10000 false Bd2: 8104899-8114898 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585909 5269 Grass View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.101        
cufflinks 0.05     Low  
cufflinks 0.03     Low Low
cufflinks 0.057     Low  
cufflinks 0.18        
cufflinks 0.021     Low Low
cufflinks 0.103        
cufflinks 0.047     Low  
cufflinks 0.047     Low  
cufflinks 0.023     Low Low
cufflinks 0.234       High
cufflinks 0.038     Low  
cufflinks 0.041     Low  
cufflinks 0.087        
cufflinks 0.095        
cufflinks 0.092        
cufflinks 0.09     Low  
cufflinks 0.634       High
cufflinks 0.704       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.157        
cufflinks 0.054     Low  
cufflinks 0.058     Low  
cufflinks 0.041     Low  
cufflinks 0.057     Low  
cufflinks 0.038     Low  
cufflinks 0.16        
cufflinks 0.054     Low  
cufflinks 0.111     Low  
cufflinks 0.144        

0 Strain