Gene : Bradi1g64640 B. distachyon v3.1
Defline:  (1 of 1) PTHR24095:SF169 - ACETATE/BUTYRATE--COA LIGASE AAE7, PEROXISOMAL Genomic Order:  8176
Name:  ? Bradi1g64640 Secondary Identifier:  ? PAC:32805648
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-1121 Brachypodium distachyon pathologic  
Bdistachyon PWY-321 Brachypodium distachyon pathologic  
Bdistachyon PWY-5136 Brachypodium distachyon pathologic  
Bdistachyon PWY-5143 Brachypodium distachyon pathologic  
Bdistachyon PWY-5147 Brachypodium distachyon pathologic  
Bdistachyon PWY-5156 Brachypodium distachyon pathologic  
Bdistachyon PWY-561 Brachypodium distachyon pathologic  
Bdistachyon PWY-5885 Brachypodium distachyon pathologic  
Bdistachyon PWY-5971 Brachypodium distachyon pathologic  
Bdistachyon PWY-5989 Brachypodium distachyon pathologic  
Bdistachyon PWY66-21 Brachypodium distachyon pathologic  
Bdistachyon PWY-6733 Brachypodium distachyon pathologic  
Bdistachyon PWY-6803 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g64640 0.5kb upstream 0.5kb upstream 5565 true Bd1: 64008170-64013734 Brachypodium distachyon
Bradi1g64640 0.5kb upstream 0.5kb upstream 500 false Bd1: 64008170-64008669 Brachypodium distachyon
Bradi1g64640 0.5kb downstream 0.5kb downstream 5565 true Bd1: 64008670-64014234 Brachypodium distachyon
Bradi1g64640 0.5kb downstream 0.5kb downstream 500 false Bd1: 64013735-64014234 Brachypodium distachyon
Bradi1g64640 1.0kb upstream 1.0kb upstream 6065 true Bd1: 64007670-64013734 Brachypodium distachyon
Bradi1g64640 1.0kb upstream 1.0kb upstream 1000 false Bd1: 64007670-64008669 Brachypodium distachyon
Bradi1g64640 1.0kb downstream 1.0kb downstream 6065 true Bd1: 64008670-64014734 Brachypodium distachyon
Bradi1g64640 1.0kb downstream 1.0kb downstream 1000 false Bd1: 64013735-64014734 Brachypodium distachyon
Bradi1g64640 2.0kb upstream 2.0kb upstream 7065 true Bd1: 64006670-64013734 Brachypodium distachyon
Bradi1g64640 2.0kb upstream 2.0kb upstream 2000 false Bd1: 64006670-64008669 Brachypodium distachyon
Bradi1g64640 2.0kb downstream 2.0kb downstream 7065 true Bd1: 64008670-64015734 Brachypodium distachyon
Bradi1g64640 2.0kb downstream 2.0kb downstream 2000 false Bd1: 64013735-64015734 Brachypodium distachyon
Bradi1g64640 5.0kb upstream 5.0kb upstream 10065 true Bd1: 64003670-64013734 Brachypodium distachyon
Bradi1g64640 5.0kb upstream 5.0kb upstream 5000 false Bd1: 64003670-64008669 Brachypodium distachyon
Bradi1g64640 5.0kb downstream 5.0kb downstream 10065 true Bd1: 64008670-64018734 Brachypodium distachyon
Bradi1g64640 5.0kb downstream 5.0kb downstream 5000 false Bd1: 64013735-64018734 Brachypodium distachyon
Bradi1g64640 10.0kb upstream 10.0kb upstream 15065 true Bd1: 63998670-64013734 Brachypodium distachyon
Bradi1g64640 10.0kb upstream 10.0kb upstream 10000 false Bd1: 63998670-64008669 Brachypodium distachyon
Bradi1g64640 10.0kb downstream 10.0kb downstream 15065 true Bd1: 64008670-64023734 Brachypodium distachyon
Bradi1g64640 10.0kb downstream 10.0kb downstream 10000 false Bd1: 64013735-64023734 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573139 5269 Grass View MSA
122045241 5273 Angiosperm View MSA
121345073 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.059     High  
cufflinks 16.136     High  
cufflinks 21.826     High High
cufflinks 19.403     High  
cufflinks 13.244     High  
cufflinks 10.148     High  
cufflinks 9.565     High  
cufflinks 14.893     High  
cufflinks 11.066     High  
cufflinks 19.272     High  
cufflinks 22.418     High High
cufflinks 15.921     High  
cufflinks 18.123     High  
cufflinks 22.205     High High
cufflinks 18.66     High  
cufflinks 10.577     High  
cufflinks 14.52     High  
cufflinks 6.453       Low
cufflinks 9.99        
cufflinks 6.892       Low
cufflinks 5.932       Low
cufflinks 21.834     High High
cufflinks 17.56     High  
cufflinks 11.991     High  
cufflinks 9.114        
cufflinks 20.99     High  
cufflinks 21.04     High  
cufflinks 25.156     High High
cufflinks 25.023     High High
cufflinks 4.944       Low

0 Strain