Gene : Bradi1g63410 B. distachyon v3.1
Defline:  (1 of 1) PTHR11935//PTHR11935:SF94 - BETA LACTAMASE DOMAIN // PROTEIN Y17G7B.3 Genomic Order:  8019
Name:  ? Bradi1g63410 Secondary Identifier:  ? PAC:32792360
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g63410 0.5kb upstream 0.5kb upstream 5992 true Bd1: 62796022-62802013 Brachypodium distachyon
Bradi1g63410 0.5kb upstream 0.5kb upstream 500 false Bd1: 62796022-62796521 Brachypodium distachyon
Bradi1g63410 0.5kb downstream 0.5kb downstream 5992 true Bd1: 62796522-62802513 Brachypodium distachyon
Bradi1g63410 0.5kb downstream 0.5kb downstream 500 false Bd1: 62802014-62802513 Brachypodium distachyon
Bradi1g63410 1.0kb upstream 1.0kb upstream 6492 true Bd1: 62795522-62802013 Brachypodium distachyon
Bradi1g63410 1.0kb upstream 1.0kb upstream 1000 false Bd1: 62795522-62796521 Brachypodium distachyon
Bradi1g63410 1.0kb downstream 1.0kb downstream 6492 true Bd1: 62796522-62803013 Brachypodium distachyon
Bradi1g63410 1.0kb downstream 1.0kb downstream 1000 false Bd1: 62802014-62803013 Brachypodium distachyon
Bradi1g63410 2.0kb upstream 2.0kb upstream 7492 true Bd1: 62794522-62802013 Brachypodium distachyon
Bradi1g63410 2.0kb upstream 2.0kb upstream 2000 false Bd1: 62794522-62796521 Brachypodium distachyon
Bradi1g63410 2.0kb downstream 2.0kb downstream 7492 true Bd1: 62796522-62804013 Brachypodium distachyon
Bradi1g63410 2.0kb downstream 2.0kb downstream 2000 false Bd1: 62802014-62804013 Brachypodium distachyon
Bradi1g63410 5.0kb upstream 5.0kb upstream 10492 true Bd1: 62791522-62802013 Brachypodium distachyon
Bradi1g63410 5.0kb upstream 5.0kb upstream 5000 false Bd1: 62791522-62796521 Brachypodium distachyon
Bradi1g63410 5.0kb downstream 5.0kb downstream 10492 true Bd1: 62796522-62807013 Brachypodium distachyon
Bradi1g63410 5.0kb downstream 5.0kb downstream 5000 false Bd1: 62802014-62807013 Brachypodium distachyon
Bradi1g63410 10.0kb upstream 10.0kb upstream 15492 true Bd1: 62786522-62802013 Brachypodium distachyon
Bradi1g63410 10.0kb upstream 10.0kb upstream 10000 false Bd1: 62786522-62796521 Brachypodium distachyon
Bradi1g63410 10.0kb downstream 10.0kb downstream 15492 true Bd1: 62796522-62812013 Brachypodium distachyon
Bradi1g63410 10.0kb downstream 10.0kb downstream 10000 false Bd1: 62802014-62812013 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573683 5269 Grass View MSA
122047531 5273 Angiosperm View MSA
121343802 5274 Embryophyte View MSA
123424781 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.056       Low
cufflinks 9.131        
cufflinks 9.973        
cufflinks 11.064     High High
cufflinks 7.841        
cufflinks 7.382        
cufflinks 8.127        
cufflinks 6.233       Low
cufflinks 6.128       Low
cufflinks 7.608        
cufflinks 7.248        
cufflinks 6.846        
cufflinks 6.413       Low
cufflinks 6.778        
cufflinks 8.464        
cufflinks 6.972        
cufflinks 8.173        
cufflinks 8.326        
cufflinks 6.893        
cufflinks 7.458        
cufflinks 8.609        
cufflinks 6.502        
cufflinks 6.671        
cufflinks 7.006        
cufflinks 7.949        
cufflinks 11.571     High High
cufflinks 6.944        
cufflinks 10.501        
cufflinks 8.696        
cufflinks 7.662        

0 Strain