Gene : Bradi1g55790 B. distachyon v3.1
Defline:  (1 of 1) PTHR10217//PTHR10217:SF526 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED Genomic Order:  6997
Name:  ? Bradi1g55790 Secondary Identifier:  ? PAC:32797238
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g55790 0.5kb upstream 0.5kb upstream 3889 true Bd1: 54493188-54497076 Brachypodium distachyon
Bradi1g55790 0.5kb upstream 0.5kb upstream 500 false Bd1: 54496577-54497076 Brachypodium distachyon
Bradi1g55790 0.5kb downstream 0.5kb downstream 3889 true Bd1: 54492688-54496576 Brachypodium distachyon
Bradi1g55790 0.5kb downstream 0.5kb downstream 500 false Bd1: 54492688-54493187 Brachypodium distachyon
Bradi1g55790 1.0kb upstream 1.0kb upstream 4389 true Bd1: 54493188-54497576 Brachypodium distachyon
Bradi1g55790 1.0kb upstream 1.0kb upstream 1000 false Bd1: 54496577-54497576 Brachypodium distachyon
Bradi1g55790 1.0kb downstream 1.0kb downstream 4389 true Bd1: 54492188-54496576 Brachypodium distachyon
Bradi1g55790 1.0kb downstream 1.0kb downstream 1000 false Bd1: 54492188-54493187 Brachypodium distachyon
Bradi1g55790 2.0kb upstream 2.0kb upstream 5389 true Bd1: 54493188-54498576 Brachypodium distachyon
Bradi1g55790 2.0kb upstream 2.0kb upstream 2000 false Bd1: 54496577-54498576 Brachypodium distachyon
Bradi1g55790 2.0kb downstream 2.0kb downstream 5389 true Bd1: 54491188-54496576 Brachypodium distachyon
Bradi1g55790 2.0kb downstream 2.0kb downstream 2000 false Bd1: 54491188-54493187 Brachypodium distachyon
Bradi1g55790 5.0kb upstream 5.0kb upstream 8389 true Bd1: 54493188-54501576 Brachypodium distachyon
Bradi1g55790 5.0kb upstream 5.0kb upstream 5000 false Bd1: 54496577-54501576 Brachypodium distachyon
Bradi1g55790 5.0kb downstream 5.0kb downstream 8389 true Bd1: 54488188-54496576 Brachypodium distachyon
Bradi1g55790 5.0kb downstream 5.0kb downstream 5000 false Bd1: 54488188-54493187 Brachypodium distachyon
Bradi1g55790 10.0kb upstream 10.0kb upstream 13389 true Bd1: 54493188-54506576 Brachypodium distachyon
Bradi1g55790 10.0kb upstream 10.0kb upstream 10000 false Bd1: 54496577-54506576 Brachypodium distachyon
Bradi1g55790 10.0kb downstream 10.0kb downstream 13389 true Bd1: 54483188-54496576 Brachypodium distachyon
Bradi1g55790 10.0kb downstream 10.0kb downstream 10000 false Bd1: 54483188-54493187 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993642 5273 Angiosperm View MSA
124580619 5269 Grass View MSA
121263904 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low Low
cufflinks 0.034     Low  
cufflinks 0.012     Low  
cufflinks 0.039     Low  
cufflinks 0.009     Low Low
cufflinks 0.021     Low  
cufflinks 0.028     Low  
cufflinks 0.035     Low  
cufflinks 0.015     Low  
cufflinks 0.043     Low  
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.006     Low Low
cufflinks 0.016     Low  
cufflinks 0.038     Low  
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.028     Low  
cufflinks 0.031     Low  
cufflinks 0.027     Low  
cufflinks 0.033     Low  
cufflinks 0.028     Low  
cufflinks 0.03     Low  
cufflinks 0.009     Low Low
cufflinks 0.092     Low High
cufflinks 0.045     Low High

0 Strain