Gene : Bradi1g54380 B. distachyon v3.1
Defline:  (1 of 5) PF10184 - Uncharacterized conserved protein (DUF2358) (DUF2358) Genomic Order:  6812
Name:  ? Bradi1g54380 Secondary Identifier:  ? PAC:32805826
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g54380 0.5kb upstream 0.5kb upstream 1549 true Bd1: 52944615-52946163 Brachypodium distachyon
Bradi1g54380 0.5kb upstream 0.5kb upstream 500 false Bd1: 52945664-52946163 Brachypodium distachyon
Bradi1g54380 0.5kb downstream 0.5kb downstream 1549 true Bd1: 52944115-52945663 Brachypodium distachyon
Bradi1g54380 0.5kb downstream 0.5kb downstream 500 false Bd1: 52944115-52944614 Brachypodium distachyon
Bradi1g54380 1.0kb upstream 1.0kb upstream 2049 true Bd1: 52944615-52946663 Brachypodium distachyon
Bradi1g54380 1.0kb upstream 1.0kb upstream 1000 false Bd1: 52945664-52946663 Brachypodium distachyon
Bradi1g54380 1.0kb downstream 1.0kb downstream 2049 true Bd1: 52943615-52945663 Brachypodium distachyon
Bradi1g54380 1.0kb downstream 1.0kb downstream 1000 false Bd1: 52943615-52944614 Brachypodium distachyon
Bradi1g54380 2.0kb upstream 2.0kb upstream 3049 true Bd1: 52944615-52947663 Brachypodium distachyon
Bradi1g54380 2.0kb upstream 2.0kb upstream 2000 false Bd1: 52945664-52947663 Brachypodium distachyon
Bradi1g54380 2.0kb downstream 2.0kb downstream 3049 true Bd1: 52942615-52945663 Brachypodium distachyon
Bradi1g54380 2.0kb downstream 2.0kb downstream 2000 false Bd1: 52942615-52944614 Brachypodium distachyon
Bradi1g54380 5.0kb upstream 5.0kb upstream 6049 true Bd1: 52944615-52950663 Brachypodium distachyon
Bradi1g54380 5.0kb upstream 5.0kb upstream 5000 false Bd1: 52945664-52950663 Brachypodium distachyon
Bradi1g54380 5.0kb downstream 5.0kb downstream 6049 true Bd1: 52939615-52945663 Brachypodium distachyon
Bradi1g54380 5.0kb downstream 5.0kb downstream 5000 false Bd1: 52939615-52944614 Brachypodium distachyon
Bradi1g54380 10.0kb upstream 10.0kb upstream 11049 true Bd1: 52944615-52955663 Brachypodium distachyon
Bradi1g54380 10.0kb upstream 10.0kb upstream 10000 false Bd1: 52945664-52955663 Brachypodium distachyon
Bradi1g54380 10.0kb downstream 10.0kb downstream 11049 true Bd1: 52934615-52945663 Brachypodium distachyon
Bradi1g54380 10.0kb downstream 10.0kb downstream 10000 false Bd1: 52934615-52944614 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586372 5269 Grass View MSA
122044310 5273 Angiosperm View MSA
121347374 5274 Embryophyte View MSA
123427287 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.118     High  
cufflinks 8.305        
cufflinks 4.98        
cufflinks 8.4        
cufflinks 8.467        
cufflinks 14.055     High  
cufflinks 9.869     High  
cufflinks 11.96     High  
cufflinks 12.206     High  
cufflinks 8.254        
cufflinks 13.03     High  
cufflinks 9.141        
cufflinks 16.246     High High
cufflinks 13.165     High  
cufflinks 14.922     High  
cufflinks 11.604     High  
cufflinks 9.257        
cufflinks 0.222       Low
cufflinks 2.919        
cufflinks 2.29       Low
cufflinks 2.172       Low
cufflinks 5.759        
cufflinks 11.896     High  
cufflinks 16.434     High High
cufflinks 16.03     High High
cufflinks 6.57        
cufflinks 7.439        
cufflinks 6.553        
cufflinks 5.724        
cufflinks 2.529        

0 Strain