Gene : Bradi1g02205 B. distachyon v3.1
Defline:  (1 of 4) PF07468 - Agglutinin domain (Agglutinin) Genomic Order:  275
Name:  ? Bradi1g02205 Secondary Identifier:  ? PAC:32803833
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g02205 0.5kb upstream 0.5kb upstream 3783 true Bd1: 1494520-1498302 Brachypodium distachyon
Bradi1g02205 0.5kb upstream 0.5kb upstream 500 false Bd1: 1494520-1495019 Brachypodium distachyon
Bradi1g02205 0.5kb downstream 0.5kb downstream 3783 true Bd1: 1495020-1498802 Brachypodium distachyon
Bradi1g02205 0.5kb downstream 0.5kb downstream 500 false Bd1: 1498303-1498802 Brachypodium distachyon
Bradi1g02205 1.0kb upstream 1.0kb upstream 4283 true Bd1: 1494020-1498302 Brachypodium distachyon
Bradi1g02205 1.0kb upstream 1.0kb upstream 1000 false Bd1: 1494020-1495019 Brachypodium distachyon
Bradi1g02205 1.0kb downstream 1.0kb downstream 4283 true Bd1: 1495020-1499302 Brachypodium distachyon
Bradi1g02205 1.0kb downstream 1.0kb downstream 1000 false Bd1: 1498303-1499302 Brachypodium distachyon
Bradi1g02205 2.0kb upstream 2.0kb upstream 5283 true Bd1: 1493020-1498302 Brachypodium distachyon
Bradi1g02205 2.0kb upstream 2.0kb upstream 2000 false Bd1: 1493020-1495019 Brachypodium distachyon
Bradi1g02205 2.0kb downstream 2.0kb downstream 5283 true Bd1: 1495020-1500302 Brachypodium distachyon
Bradi1g02205 2.0kb downstream 2.0kb downstream 2000 false Bd1: 1498303-1500302 Brachypodium distachyon
Bradi1g02205 5.0kb upstream 5.0kb upstream 8283 true Bd1: 1490020-1498302 Brachypodium distachyon
Bradi1g02205 5.0kb upstream 5.0kb upstream 5000 false Bd1: 1490020-1495019 Brachypodium distachyon
Bradi1g02205 5.0kb downstream 5.0kb downstream 8283 true Bd1: 1495020-1503302 Brachypodium distachyon
Bradi1g02205 5.0kb downstream 5.0kb downstream 5000 false Bd1: 1498303-1503302 Brachypodium distachyon
Bradi1g02205 10.0kb upstream 10.0kb upstream 13283 true Bd1: 1485020-1498302 Brachypodium distachyon
Bradi1g02205 10.0kb upstream 10.0kb upstream 10000 false Bd1: 1485020-1495019 Brachypodium distachyon
Bradi1g02205 10.0kb downstream 10.0kb downstream 13283 true Bd1: 1495020-1508302 Brachypodium distachyon
Bradi1g02205 10.0kb downstream 10.0kb downstream 10000 false Bd1: 1498303-1508302 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029421 5273 Angiosperm View MSA
124590439 5269 Grass View MSA
121348691 5274 Embryophyte View MSA
123380974 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.07     Low  
cufflinks 0.198        
cufflinks 0.366        
cufflinks 0.243        
cufflinks 0.972       High
cufflinks 0.096        
cufflinks 0.14        
cufflinks 0.207        
cufflinks 0.128        
cufflinks 0.307        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.174        
cufflinks 0.189        
cufflinks 0.003     Low Low
cufflinks 0.192        
cufflinks 0.069     Low  
cufflinks 0.219        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.18     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.258        
cufflinks 0.247        
cufflinks 0.165        
cufflinks 0.133        
cufflinks 0.369        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.397        
cufflinks 0.387        
cufflinks 0.129        

0 Strain