Gene : PRR9 A. thaliana TAIR10
Primary Identifier:  ? AT2G46790 Defline:  (1 of 1) K12128 - pseudo-response regulator 9 (PRR9)
Genomic Order:  4107 Name:  ? AT2G46790
Secondary Identifier:  ? PAC:19642714
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G46790 0.5kb upstream 0.5kb upstream 2939 true Chr2: 19232149-19235087 Arabidopsis thaliana
AT2G46790 0.5kb upstream 0.5kb upstream 500 false Chr2: 19232149-19232648 Arabidopsis thaliana
AT2G46790 0.5kb downstream 0.5kb downstream 2939 true Chr2: 19232649-19235587 Arabidopsis thaliana
AT2G46790 0.5kb downstream 0.5kb downstream 500 false Chr2: 19235088-19235587 Arabidopsis thaliana
AT2G46790 1.0kb upstream 1.0kb upstream 3439 true Chr2: 19231649-19235087 Arabidopsis thaliana
AT2G46790 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19231649-19232648 Arabidopsis thaliana
AT2G46790 1.0kb downstream 1.0kb downstream 3439 true Chr2: 19232649-19236087 Arabidopsis thaliana
AT2G46790 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19235088-19236087 Arabidopsis thaliana
AT2G46790 2.0kb upstream 2.0kb upstream 4439 true Chr2: 19230649-19235087 Arabidopsis thaliana
AT2G46790 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19230649-19232648 Arabidopsis thaliana
AT2G46790 2.0kb downstream 2.0kb downstream 4439 true Chr2: 19232649-19237087 Arabidopsis thaliana
AT2G46790 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19235088-19237087 Arabidopsis thaliana
AT2G46790 5.0kb upstream 5.0kb upstream 7439 true Chr2: 19227649-19235087 Arabidopsis thaliana
AT2G46790 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19227649-19232648 Arabidopsis thaliana
AT2G46790 5.0kb downstream 5.0kb downstream 7439 true Chr2: 19232649-19240087 Arabidopsis thaliana
AT2G46790 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19235088-19240087 Arabidopsis thaliana
AT2G46790 10.0kb upstream 10.0kb upstream 12439 true Chr2: 19222649-19235087 Arabidopsis thaliana
AT2G46790 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19222649-19232648 Arabidopsis thaliana
AT2G46790 10.0kb downstream 10.0kb downstream 12439 true Chr2: 19232649-19245087 Arabidopsis thaliana
AT2G46790 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19235088-19245087 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364894 5261 Brassicaceae View MSA
123834605 5264 Brassicales-Malvales View MSA
124350739 5266 SBM View MSA
124251308 5268 Malvidae View MSA
124070705 5270 Rosid View MSA
123743844 5271 Pentapetalae View MSA
122796844 5272 Eudicot View MSA
122049378 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121348343 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.106     Low Low
cufflinks 0.721        
cufflinks 0.354        
cufflinks 2.281       High
cufflinks 1.357        
cufflinks 0.237     Low  

0 Strain