Gene : AT2G47630 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11614//PTHR11614:SF88 - PHOSPHOLIPASE-RELATED // ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  4192
Name:  ? AT2G47630 Secondary Identifier:  ? PAC:19640269
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7420 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G47630 0.5kb upstream 0.5kb upstream 3012 true Chr2: 19534003-19537014 Arabidopsis thaliana
AT2G47630 0.5kb upstream 0.5kb upstream 500 false Chr2: 19534003-19534502 Arabidopsis thaliana
AT2G47630 0.5kb downstream 0.5kb downstream 3012 true Chr2: 19534503-19537514 Arabidopsis thaliana
AT2G47630 0.5kb downstream 0.5kb downstream 500 false Chr2: 19537015-19537514 Arabidopsis thaliana
AT2G47630 1.0kb upstream 1.0kb upstream 3512 true Chr2: 19533503-19537014 Arabidopsis thaliana
AT2G47630 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19533503-19534502 Arabidopsis thaliana
AT2G47630 1.0kb downstream 1.0kb downstream 3512 true Chr2: 19534503-19538014 Arabidopsis thaliana
AT2G47630 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19537015-19538014 Arabidopsis thaliana
AT2G47630 2.0kb upstream 2.0kb upstream 4512 true Chr2: 19532503-19537014 Arabidopsis thaliana
AT2G47630 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19532503-19534502 Arabidopsis thaliana
AT2G47630 2.0kb downstream 2.0kb downstream 4512 true Chr2: 19534503-19539014 Arabidopsis thaliana
AT2G47630 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19537015-19539014 Arabidopsis thaliana
AT2G47630 5.0kb upstream 5.0kb upstream 7512 true Chr2: 19529503-19537014 Arabidopsis thaliana
AT2G47630 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19529503-19534502 Arabidopsis thaliana
AT2G47630 5.0kb downstream 5.0kb downstream 7512 true Chr2: 19534503-19542014 Arabidopsis thaliana
AT2G47630 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19537015-19542014 Arabidopsis thaliana
AT2G47630 10.0kb upstream 10.0kb upstream 12512 true Chr2: 19524503-19537014 Arabidopsis thaliana
AT2G47630 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19524503-19534502 Arabidopsis thaliana
AT2G47630 10.0kb downstream 10.0kb downstream 12512 true Chr2: 19534503-19547014 Arabidopsis thaliana
AT2G47630 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19537015-19547014 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381404 5261 Brassicaceae View MSA
123828649 5264 Brassicales-Malvales View MSA
124341266 5266 SBM View MSA
124252573 5268 Malvidae View MSA
124073992 5270 Rosid View MSA
123737688 5271 Pentapetalae View MSA
122790708 5272 Eudicot View MSA
122042600 5273 Angiosperm View MSA
121350082 5274 Embryophyte View MSA
123428617 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.532        
cufflinks 7.547        
cufflinks 2.64       Low
cufflinks 8.007        
cufflinks 2.443       Low
cufflinks 10.023       High

0 Strain