Gene : ATG8E A. thaliana TAIR10
Primary Identifier:  ? AT2G45170 Defline:  (1 of 2) PTHR10969//PTHR10969:SF39 - MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED // AUTOPHAGY-RELATED PROTEIN 8F
Genomic Order:  3935 Name:  ? AT2G45170
Secondary Identifier:  ? PAC:19641058
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G45170 0.5kb upstream 0.5kb upstream 1954 true Chr2: 18623764-18625717 Arabidopsis thaliana
AT2G45170 0.5kb upstream 0.5kb upstream 500 false Chr2: 18623764-18624263 Arabidopsis thaliana
AT2G45170 0.5kb downstream 0.5kb downstream 1954 true Chr2: 18624264-18626217 Arabidopsis thaliana
AT2G45170 0.5kb downstream 0.5kb downstream 500 false Chr2: 18625718-18626217 Arabidopsis thaliana
AT2G45170 1.0kb upstream 1.0kb upstream 2454 true Chr2: 18623264-18625717 Arabidopsis thaliana
AT2G45170 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18623264-18624263 Arabidopsis thaliana
AT2G45170 1.0kb downstream 1.0kb downstream 2454 true Chr2: 18624264-18626717 Arabidopsis thaliana
AT2G45170 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18625718-18626717 Arabidopsis thaliana
AT2G45170 2.0kb upstream 2.0kb upstream 3454 true Chr2: 18622264-18625717 Arabidopsis thaliana
AT2G45170 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18622264-18624263 Arabidopsis thaliana
AT2G45170 2.0kb downstream 2.0kb downstream 3454 true Chr2: 18624264-18627717 Arabidopsis thaliana
AT2G45170 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18625718-18627717 Arabidopsis thaliana
AT2G45170 5.0kb upstream 5.0kb upstream 6454 true Chr2: 18619264-18625717 Arabidopsis thaliana
AT2G45170 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18619264-18624263 Arabidopsis thaliana
AT2G45170 5.0kb downstream 5.0kb downstream 6454 true Chr2: 18624264-18630717 Arabidopsis thaliana
AT2G45170 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18625718-18630717 Arabidopsis thaliana
AT2G45170 10.0kb upstream 10.0kb upstream 11454 true Chr2: 18614264-18625717 Arabidopsis thaliana
AT2G45170 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18614264-18624263 Arabidopsis thaliana
AT2G45170 10.0kb downstream 10.0kb downstream 11454 true Chr2: 18624264-18635717 Arabidopsis thaliana
AT2G45170 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18625718-18635717 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510358 5273 Angiosperm View MSA
122362687 5261 Brassicaceae View MSA
123798403 5264 Brassicales-Malvales View MSA
124296042 5266 SBM View MSA
124148311 5268 Malvidae View MSA
123874332 5270 Rosid View MSA
123458323 5271 Pentapetalae View MSA
122493729 5272 Eudicot View MSA
120783460 5274 Embryophyte View MSA
122825468 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.419        
cufflinks 8.406        
cufflinks 11.615        
cufflinks 10.561        
cufflinks 18.96       High
cufflinks 5.662       Low

0 Strain