Gene : AT2G44850 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31296:SF1 - UPF0565 PROTEIN C2ORF69 Genomic Order:  3902
Name:  ? AT2G44850 Secondary Identifier:  ? PAC:19639570
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G44850 0.5kb upstream 0.5kb upstream 2708 true Chr2: 18498172-18500879 Arabidopsis thaliana
AT2G44850 0.5kb upstream 0.5kb upstream 500 false Chr2: 18498172-18498671 Arabidopsis thaliana
AT2G44850 0.5kb downstream 0.5kb downstream 2708 true Chr2: 18498672-18501379 Arabidopsis thaliana
AT2G44850 0.5kb downstream 0.5kb downstream 500 false Chr2: 18500880-18501379 Arabidopsis thaliana
AT2G44850 1.0kb upstream 1.0kb upstream 3208 true Chr2: 18497672-18500879 Arabidopsis thaliana
AT2G44850 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18497672-18498671 Arabidopsis thaliana
AT2G44850 1.0kb downstream 1.0kb downstream 3208 true Chr2: 18498672-18501879 Arabidopsis thaliana
AT2G44850 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18500880-18501879 Arabidopsis thaliana
AT2G44850 2.0kb upstream 2.0kb upstream 4208 true Chr2: 18496672-18500879 Arabidopsis thaliana
AT2G44850 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18496672-18498671 Arabidopsis thaliana
AT2G44850 2.0kb downstream 2.0kb downstream 4208 true Chr2: 18498672-18502879 Arabidopsis thaliana
AT2G44850 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18500880-18502879 Arabidopsis thaliana
AT2G44850 5.0kb upstream 5.0kb upstream 7208 true Chr2: 18493672-18500879 Arabidopsis thaliana
AT2G44850 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18493672-18498671 Arabidopsis thaliana
AT2G44850 5.0kb downstream 5.0kb downstream 7208 true Chr2: 18498672-18505879 Arabidopsis thaliana
AT2G44850 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18500880-18505879 Arabidopsis thaliana
AT2G44850 10.0kb upstream 10.0kb upstream 12208 true Chr2: 18488672-18500879 Arabidopsis thaliana
AT2G44850 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18488672-18498671 Arabidopsis thaliana
AT2G44850 10.0kb downstream 10.0kb downstream 12208 true Chr2: 18498672-18510879 Arabidopsis thaliana
AT2G44850 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18500880-18510879 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122329246 5261 Brassicaceae Singleton cluster - no MSA
123837100 5264 Brassicales-Malvales View MSA
124344504 5266 SBM View MSA
124241137 5268 Malvidae View MSA
124067647 5270 Rosid View MSA
123739442 5271 Pentapetalae View MSA
122787900 5272 Eudicot View MSA
122048933 5273 Angiosperm View MSA
121346083 5274 Embryophyte View MSA
123425579 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.905       Low
cufflinks 2.547        
cufflinks 1.924        
cufflinks 2.677       High
cufflinks 2.307        
cufflinks 2.012        

0 Strain