Sequence Feature Displayer
Ontology Annotation Displayer
1 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-6303 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT2G45610 0.5kb upstream | 0.5kb | upstream | 1624 | true | Chr2: 18790963-18792586 | Arabidopsis thaliana |
AT2G45610 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr2: 18790963-18791462 | Arabidopsis thaliana |
AT2G45610 0.5kb downstream | 0.5kb | downstream | 1624 | true | Chr2: 18791463-18793086 | Arabidopsis thaliana |
AT2G45610 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr2: 18792587-18793086 | Arabidopsis thaliana |
AT2G45610 1.0kb upstream | 1.0kb | upstream | 2124 | true | Chr2: 18790463-18792586 | Arabidopsis thaliana |
AT2G45610 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr2: 18790463-18791462 | Arabidopsis thaliana |
AT2G45610 1.0kb downstream | 1.0kb | downstream | 2124 | true | Chr2: 18791463-18793586 | Arabidopsis thaliana |
AT2G45610 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr2: 18792587-18793586 | Arabidopsis thaliana |
AT2G45610 2.0kb upstream | 2.0kb | upstream | 3124 | true | Chr2: 18789463-18792586 | Arabidopsis thaliana |
AT2G45610 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr2: 18789463-18791462 | Arabidopsis thaliana |
AT2G45610 2.0kb downstream | 2.0kb | downstream | 3124 | true | Chr2: 18791463-18794586 | Arabidopsis thaliana |
AT2G45610 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr2: 18792587-18794586 | Arabidopsis thaliana |
AT2G45610 5.0kb upstream | 5.0kb | upstream | 6124 | true | Chr2: 18786463-18792586 | Arabidopsis thaliana |
AT2G45610 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr2: 18786463-18791462 | Arabidopsis thaliana |
AT2G45610 5.0kb downstream | 5.0kb | downstream | 6124 | true | Chr2: 18791463-18797586 | Arabidopsis thaliana |
AT2G45610 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr2: 18792587-18797586 | Arabidopsis thaliana |
AT2G45610 10.0kb upstream | 10.0kb | upstream | 11124 | true | Chr2: 18781463-18792586 | Arabidopsis thaliana |
AT2G45610 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr2: 18781463-18791462 | Arabidopsis thaliana |
AT2G45610 10.0kb downstream | 10.0kb | downstream | 11124 | true | Chr2: 18791463-18802586 | Arabidopsis thaliana |
AT2G45610 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr2: 18792587-18802586 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122040959 | 5273 | Angiosperm | View MSA |
122375013 | 5261 | Brassicaceae | View MSA |
123828832 | 5264 | Brassicales-Malvales | View MSA |
124343255 | 5266 | SBM | View MSA |
124244838 | 5268 | Malvidae | View MSA |
124067894 | 5270 | Rosid | View MSA |
123744138 | 5271 | Pentapetalae | View MSA |
122796188 | 5272 | Eudicot | View MSA |
121309778 | 5274 | Embryophyte | View MSA |
123347440 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.014 | Low | Low | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.038 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.067 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed |