Gene : AT2G45870 A. thaliana TAIR10
Defline:  (1 of 2) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) Genomic Order:  4006
Name:  ? AT2G45870 Secondary Identifier:  ? PAC:19642530
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G45870 0.5kb upstream 0.5kb upstream 2084 true Chr2: 18875394-18877477 Arabidopsis thaliana
AT2G45870 0.5kb upstream 0.5kb upstream 500 false Chr2: 18875394-18875893 Arabidopsis thaliana
AT2G45870 0.5kb downstream 0.5kb downstream 2084 true Chr2: 18875894-18877977 Arabidopsis thaliana
AT2G45870 0.5kb downstream 0.5kb downstream 500 false Chr2: 18877478-18877977 Arabidopsis thaliana
AT2G45870 1.0kb upstream 1.0kb upstream 2584 true Chr2: 18874894-18877477 Arabidopsis thaliana
AT2G45870 1.0kb upstream 1.0kb upstream 1000 false Chr2: 18874894-18875893 Arabidopsis thaliana
AT2G45870 1.0kb downstream 1.0kb downstream 2584 true Chr2: 18875894-18878477 Arabidopsis thaliana
AT2G45870 1.0kb downstream 1.0kb downstream 1000 false Chr2: 18877478-18878477 Arabidopsis thaliana
AT2G45870 2.0kb upstream 2.0kb upstream 3584 true Chr2: 18873894-18877477 Arabidopsis thaliana
AT2G45870 2.0kb upstream 2.0kb upstream 2000 false Chr2: 18873894-18875893 Arabidopsis thaliana
AT2G45870 2.0kb downstream 2.0kb downstream 3584 true Chr2: 18875894-18879477 Arabidopsis thaliana
AT2G45870 2.0kb downstream 2.0kb downstream 2000 false Chr2: 18877478-18879477 Arabidopsis thaliana
AT2G45870 5.0kb upstream 5.0kb upstream 6584 true Chr2: 18870894-18877477 Arabidopsis thaliana
AT2G45870 5.0kb upstream 5.0kb upstream 5000 false Chr2: 18870894-18875893 Arabidopsis thaliana
AT2G45870 5.0kb downstream 5.0kb downstream 6584 true Chr2: 18875894-18882477 Arabidopsis thaliana
AT2G45870 5.0kb downstream 5.0kb downstream 5000 false Chr2: 18877478-18882477 Arabidopsis thaliana
AT2G45870 10.0kb upstream 10.0kb upstream 11584 true Chr2: 18865894-18877477 Arabidopsis thaliana
AT2G45870 10.0kb upstream 10.0kb upstream 10000 false Chr2: 18865894-18875893 Arabidopsis thaliana
AT2G45870 10.0kb downstream 10.0kb downstream 11584 true Chr2: 18875894-18887477 Arabidopsis thaliana
AT2G45870 10.0kb downstream 10.0kb downstream 10000 false Chr2: 18877478-18887477 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380185 5261 Brassicaceae View MSA
123832665 5264 Brassicales-Malvales View MSA
124339133 5266 SBM View MSA
124243697 5268 Malvidae View MSA
124066850 5270 Rosid View MSA
123736824 5271 Pentapetalae View MSA
122787113 5272 Eudicot View MSA
122051206 5273 Angiosperm View MSA
121349752 5274 Embryophyte View MSA
123427884 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.116        
cufflinks 5.165        
cufflinks 1.003        
cufflinks 5.795       High
cufflinks 1.124        
cufflinks 4.323        

0 Strain