Gene : WRKY46 A. thaliana TAIR10
Primary Identifier:  ? AT2G46400 Defline:  (1 of 72) PF03106 - WRKY DNA -binding domain (WRKY)
Genomic Order:  4059 Name:  ? AT2G46400
Secondary Identifier:  ? PAC:19641583
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G46400 0.5kb upstream 0.5kb upstream 1913 true Chr2: 19043414-19045326 Arabidopsis thaliana
AT2G46400 0.5kb upstream 0.5kb upstream 500 false Chr2: 19044827-19045326 Arabidopsis thaliana
AT2G46400 0.5kb downstream 0.5kb downstream 1913 true Chr2: 19042914-19044826 Arabidopsis thaliana
AT2G46400 0.5kb downstream 0.5kb downstream 500 false Chr2: 19042914-19043413 Arabidopsis thaliana
AT2G46400 1.0kb upstream 1.0kb upstream 2413 true Chr2: 19043414-19045826 Arabidopsis thaliana
AT2G46400 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19044827-19045826 Arabidopsis thaliana
AT2G46400 1.0kb downstream 1.0kb downstream 2413 true Chr2: 19042414-19044826 Arabidopsis thaliana
AT2G46400 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19042414-19043413 Arabidopsis thaliana
AT2G46400 2.0kb upstream 2.0kb upstream 3413 true Chr2: 19043414-19046826 Arabidopsis thaliana
AT2G46400 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19044827-19046826 Arabidopsis thaliana
AT2G46400 2.0kb downstream 2.0kb downstream 3413 true Chr2: 19041414-19044826 Arabidopsis thaliana
AT2G46400 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19041414-19043413 Arabidopsis thaliana
AT2G46400 5.0kb upstream 5.0kb upstream 6413 true Chr2: 19043414-19049826 Arabidopsis thaliana
AT2G46400 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19044827-19049826 Arabidopsis thaliana
AT2G46400 5.0kb downstream 5.0kb downstream 6413 true Chr2: 19038414-19044826 Arabidopsis thaliana
AT2G46400 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19038414-19043413 Arabidopsis thaliana
AT2G46400 10.0kb upstream 10.0kb upstream 11413 true Chr2: 19043414-19054826 Arabidopsis thaliana
AT2G46400 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19044827-19054826 Arabidopsis thaliana
AT2G46400 10.0kb downstream 10.0kb downstream 11413 true Chr2: 19033414-19044826 Arabidopsis thaliana
AT2G46400 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19033414-19043413 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369370 5261 Brassicaceae View MSA
123838925 5264 Brassicales-Malvales View MSA
124348701 5266 SBM View MSA
124246092 5268 Malvidae View MSA
124070088 5270 Rosid View MSA
123748507 5271 Pentapetalae View MSA
122792318 5272 Eudicot View MSA
122042509 5273 Angiosperm View MSA
121351570 5274 Embryophyte View MSA
123382232 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.515     High  
cufflinks 156.112     High  
cufflinks 7.589       Low
cufflinks 119.293     High  
cufflinks 8.125       Low
cufflinks 115.701     High  

0 Strain