Gene : ckl5 A. thaliana TAIR10
Primary Identifier:  ? AT2G19470 Defline:  (1 of 4) K02218 - casein kinase 1 (CSNK1, CK1)
Genomic Order:  1185 Name:  ? AT2G19470
Secondary Identifier:  ? PAC:19643398
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G19470 0.5kb upstream 0.5kb upstream 3443 true Chr2: 8433611-8437053 Arabidopsis thaliana
AT2G19470 0.5kb upstream 0.5kb upstream 500 false Chr2: 8436554-8437053 Arabidopsis thaliana
AT2G19470 0.5kb downstream 0.5kb downstream 3443 true Chr2: 8433111-8436553 Arabidopsis thaliana
AT2G19470 0.5kb downstream 0.5kb downstream 500 false Chr2: 8433111-8433610 Arabidopsis thaliana
AT2G19470 1.0kb upstream 1.0kb upstream 3943 true Chr2: 8433611-8437553 Arabidopsis thaliana
AT2G19470 1.0kb upstream 1.0kb upstream 1000 false Chr2: 8436554-8437553 Arabidopsis thaliana
AT2G19470 1.0kb downstream 1.0kb downstream 3943 true Chr2: 8432611-8436553 Arabidopsis thaliana
AT2G19470 1.0kb downstream 1.0kb downstream 1000 false Chr2: 8432611-8433610 Arabidopsis thaliana
AT2G19470 2.0kb upstream 2.0kb upstream 4943 true Chr2: 8433611-8438553 Arabidopsis thaliana
AT2G19470 2.0kb upstream 2.0kb upstream 2000 false Chr2: 8436554-8438553 Arabidopsis thaliana
AT2G19470 2.0kb downstream 2.0kb downstream 4943 true Chr2: 8431611-8436553 Arabidopsis thaliana
AT2G19470 2.0kb downstream 2.0kb downstream 2000 false Chr2: 8431611-8433610 Arabidopsis thaliana
AT2G19470 5.0kb upstream 5.0kb upstream 7943 true Chr2: 8433611-8441553 Arabidopsis thaliana
AT2G19470 5.0kb upstream 5.0kb upstream 5000 false Chr2: 8436554-8441553 Arabidopsis thaliana
AT2G19470 5.0kb downstream 5.0kb downstream 7943 true Chr2: 8428611-8436553 Arabidopsis thaliana
AT2G19470 5.0kb downstream 5.0kb downstream 5000 false Chr2: 8428611-8433610 Arabidopsis thaliana
AT2G19470 10.0kb upstream 10.0kb upstream 12943 true Chr2: 8433611-8446553 Arabidopsis thaliana
AT2G19470 10.0kb upstream 10.0kb upstream 10000 false Chr2: 8436554-8446553 Arabidopsis thaliana
AT2G19470 10.0kb downstream 10.0kb downstream 12943 true Chr2: 8423611-8436553 Arabidopsis thaliana
AT2G19470 10.0kb downstream 10.0kb downstream 10000 false Chr2: 8423611-8433610 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510636 5273 Angiosperm View MSA
122366399 5261 Brassicaceae View MSA
123799167 5264 Brassicales-Malvales View MSA
124296715 5266 SBM View MSA
124148790 5268 Malvidae View MSA
123874718 5270 Rosid View MSA
123458647 5271 Pentapetalae View MSA
122494048 5272 Eudicot View MSA
120783725 5274 Embryophyte View MSA
122825701 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.541        
cufflinks 15.771        
cufflinks 19.764       High
cufflinks 16.14        
cufflinks 18.684        
cufflinks 14.743       Low

0 Strain