Gene : AT2G12900 A. thaliana TAIR10

Defline:  (1 of 1) PTHR13690:SF71 - PROTEIN C37C3.9 Genomic Order:  639
Name:  ? AT2G12900 Secondary Identifier:  ? PAC:19640907

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G12900 0.5kb upstream 0.5kb upstream 2084 true Chr2: 5293397-5295480 Arabidopsis thaliana
AT2G12900 0.5kb upstream 0.5kb upstream 500 false Chr2: 5293397-5293896 Arabidopsis thaliana
AT2G12900 0.5kb downstream 0.5kb downstream 2084 true Chr2: 5293897-5295980 Arabidopsis thaliana
AT2G12900 0.5kb downstream 0.5kb downstream 500 false Chr2: 5295481-5295980 Arabidopsis thaliana
AT2G12900 1.0kb upstream 1.0kb upstream 2584 true Chr2: 5292897-5295480 Arabidopsis thaliana
AT2G12900 1.0kb upstream 1.0kb upstream 1000 false Chr2: 5292897-5293896 Arabidopsis thaliana
AT2G12900 1.0kb downstream 1.0kb downstream 2584 true Chr2: 5293897-5296480 Arabidopsis thaliana
AT2G12900 1.0kb downstream 1.0kb downstream 1000 false Chr2: 5295481-5296480 Arabidopsis thaliana
AT2G12900 2.0kb upstream 2.0kb upstream 3584 true Chr2: 5291897-5295480 Arabidopsis thaliana
AT2G12900 2.0kb upstream 2.0kb upstream 2000 false Chr2: 5291897-5293896 Arabidopsis thaliana
AT2G12900 2.0kb downstream 2.0kb downstream 3584 true Chr2: 5293897-5297480 Arabidopsis thaliana
AT2G12900 2.0kb downstream 2.0kb downstream 2000 false Chr2: 5295481-5297480 Arabidopsis thaliana
AT2G12900 5.0kb upstream 5.0kb upstream 6584 true Chr2: 5288897-5295480 Arabidopsis thaliana
AT2G12900 5.0kb upstream 5.0kb upstream 5000 false Chr2: 5288897-5293896 Arabidopsis thaliana
AT2G12900 5.0kb downstream 5.0kb downstream 6584 true Chr2: 5293897-5300480 Arabidopsis thaliana
AT2G12900 5.0kb downstream 5.0kb downstream 5000 false Chr2: 5295481-5300480 Arabidopsis thaliana
AT2G12900 10.0kb upstream 10.0kb upstream 11584 true Chr2: 5283897-5295480 Arabidopsis thaliana
AT2G12900 10.0kb upstream 10.0kb upstream 10000 false Chr2: 5283897-5293896 Arabidopsis thaliana
AT2G12900 10.0kb downstream 10.0kb downstream 11584 true Chr2: 5293897-5305480 Arabidopsis thaliana
AT2G12900 10.0kb downstream 10.0kb downstream 10000 false Chr2: 5295481-5305480 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121499538 5273 Angiosperm View MSA
122338239 5261 Brassicaceae View MSA
123778845 5264 Brassicales-Malvales View MSA
124277182 5266 SBM View MSA
124132407 5268 Malvidae View MSA
123860715 5270 Rosid View MSA
123446311 5271 Pentapetalae View MSA
122481863 5272 Eudicot View MSA
120772877 5274 Embryophyte View MSA
122815209 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain