Gene : AT2G34580 A. thaliana TAIR10
Defline:  (1 of 1) PF12507 - Human Cytomegalovirus UL139 protein (HCMV_UL139) Genomic Order:  2792
Name:  ? AT2G34580 Secondary Identifier:  ? PAC:19639095
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G34580 0.5kb upstream 0.5kb upstream 2514 true Chr2: 14565660-14568173 Arabidopsis thaliana
AT2G34580 0.5kb upstream 0.5kb upstream 500 false Chr2: 14567674-14568173 Arabidopsis thaliana
AT2G34580 0.5kb downstream 0.5kb downstream 2514 true Chr2: 14565160-14567673 Arabidopsis thaliana
AT2G34580 0.5kb downstream 0.5kb downstream 500 false Chr2: 14565160-14565659 Arabidopsis thaliana
AT2G34580 1.0kb upstream 1.0kb upstream 3014 true Chr2: 14565660-14568673 Arabidopsis thaliana
AT2G34580 1.0kb upstream 1.0kb upstream 1000 false Chr2: 14567674-14568673 Arabidopsis thaliana
AT2G34580 1.0kb downstream 1.0kb downstream 3014 true Chr2: 14564660-14567673 Arabidopsis thaliana
AT2G34580 1.0kb downstream 1.0kb downstream 1000 false Chr2: 14564660-14565659 Arabidopsis thaliana
AT2G34580 2.0kb upstream 2.0kb upstream 4014 true Chr2: 14565660-14569673 Arabidopsis thaliana
AT2G34580 2.0kb upstream 2.0kb upstream 2000 false Chr2: 14567674-14569673 Arabidopsis thaliana
AT2G34580 2.0kb downstream 2.0kb downstream 4014 true Chr2: 14563660-14567673 Arabidopsis thaliana
AT2G34580 2.0kb downstream 2.0kb downstream 2000 false Chr2: 14563660-14565659 Arabidopsis thaliana
AT2G34580 5.0kb upstream 5.0kb upstream 7014 true Chr2: 14565660-14572673 Arabidopsis thaliana
AT2G34580 5.0kb upstream 5.0kb upstream 5000 false Chr2: 14567674-14572673 Arabidopsis thaliana
AT2G34580 5.0kb downstream 5.0kb downstream 7014 true Chr2: 14560660-14567673 Arabidopsis thaliana
AT2G34580 5.0kb downstream 5.0kb downstream 5000 false Chr2: 14560660-14565659 Arabidopsis thaliana
AT2G34580 10.0kb upstream 10.0kb upstream 12014 true Chr2: 14565660-14577673 Arabidopsis thaliana
AT2G34580 10.0kb upstream 10.0kb upstream 10000 false Chr2: 14567674-14577673 Arabidopsis thaliana
AT2G34580 10.0kb downstream 10.0kb downstream 12014 true Chr2: 14555660-14567673 Arabidopsis thaliana
AT2G34580 10.0kb downstream 10.0kb downstream 10000 false Chr2: 14555660-14565659 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026590 5273 Angiosperm View MSA
122372433 5261 Brassicaceae View MSA
123831024 5264 Brassicales-Malvales View MSA
124345915 5266 SBM View MSA
124239383 5268 Malvidae View MSA
124065405 5270 Rosid View MSA
123747470 5271 Pentapetalae View MSA
122788742 5272 Eudicot View MSA
121296406 5274 Embryophyte View MSA
123334575 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.324        
cufflinks 0.188     Low  
cufflinks 0.018     Low Low
cufflinks 0.169     Low  
cufflinks 0.034     Low  
cufflinks 0.216     Low  

0 Strain