Gene : AT2G31730 A. thaliana TAIR10
Defline:  (1 of 2) PTHR16223:SF41 - BHLH TRANSCRIPTION FACTOR Genomic Order:  2480
Name:  ? AT2G31730 Secondary Identifier:  ? PAC:19642635
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G31730 0.5kb upstream 0.5kb upstream 2612 true Chr2: 13487568-13490179 Arabidopsis thaliana
AT2G31730 0.5kb upstream 0.5kb upstream 500 false Chr2: 13489680-13490179 Arabidopsis thaliana
AT2G31730 0.5kb downstream 0.5kb downstream 2612 true Chr2: 13487068-13489679 Arabidopsis thaliana
AT2G31730 0.5kb downstream 0.5kb downstream 500 false Chr2: 13487068-13487567 Arabidopsis thaliana
AT2G31730 1.0kb upstream 1.0kb upstream 3112 true Chr2: 13487568-13490679 Arabidopsis thaliana
AT2G31730 1.0kb upstream 1.0kb upstream 1000 false Chr2: 13489680-13490679 Arabidopsis thaliana
AT2G31730 1.0kb downstream 1.0kb downstream 3112 true Chr2: 13486568-13489679 Arabidopsis thaliana
AT2G31730 1.0kb downstream 1.0kb downstream 1000 false Chr2: 13486568-13487567 Arabidopsis thaliana
AT2G31730 2.0kb upstream 2.0kb upstream 4112 true Chr2: 13487568-13491679 Arabidopsis thaliana
AT2G31730 2.0kb upstream 2.0kb upstream 2000 false Chr2: 13489680-13491679 Arabidopsis thaliana
AT2G31730 2.0kb downstream 2.0kb downstream 4112 true Chr2: 13485568-13489679 Arabidopsis thaliana
AT2G31730 2.0kb downstream 2.0kb downstream 2000 false Chr2: 13485568-13487567 Arabidopsis thaliana
AT2G31730 5.0kb upstream 5.0kb upstream 7112 true Chr2: 13487568-13494679 Arabidopsis thaliana
AT2G31730 5.0kb upstream 5.0kb upstream 5000 false Chr2: 13489680-13494679 Arabidopsis thaliana
AT2G31730 5.0kb downstream 5.0kb downstream 7112 true Chr2: 13482568-13489679 Arabidopsis thaliana
AT2G31730 5.0kb downstream 5.0kb downstream 5000 false Chr2: 13482568-13487567 Arabidopsis thaliana
AT2G31730 10.0kb upstream 10.0kb upstream 12112 true Chr2: 13487568-13499679 Arabidopsis thaliana
AT2G31730 10.0kb upstream 10.0kb upstream 10000 false Chr2: 13489680-13499679 Arabidopsis thaliana
AT2G31730 10.0kb downstream 10.0kb downstream 12112 true Chr2: 13477568-13489679 Arabidopsis thaliana
AT2G31730 10.0kb downstream 10.0kb downstream 10000 false Chr2: 13477568-13487567 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343683 5261 Brassicaceae View MSA
123840706 5264 Brassicales-Malvales View MSA
124340244 5266 SBM View MSA
124242408 5268 Malvidae View MSA
124068269 5270 Rosid View MSA
123736784 5271 Pentapetalae View MSA
122787650 5272 Eudicot View MSA
122050246 5273 Angiosperm View MSA
121311821 5274 Embryophyte View MSA
123349063 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.747        
cufflinks 12.015        
cufflinks 2.109        
cufflinks 7.945        
cufflinks 1.447       Low
cufflinks 14.083       High

0 Strain