Gene : AT2G40570 A. thaliana TAIR10
Defline:  (1 of 1) K15463 - tRNA A64-2'-O-ribosylphosphate transferase [EC:2.4.2.-] (RIT1) Genomic Order:  3441
Name:  ? AT2G40570 Secondary Identifier:  ? PAC:19640316
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G40570 0.5kb upstream 0.5kb upstream 3158 true Chr2: 16940335-16943492 Arabidopsis thaliana
AT2G40570 0.5kb upstream 0.5kb upstream 500 false Chr2: 16940335-16940834 Arabidopsis thaliana
AT2G40570 0.5kb downstream 0.5kb downstream 3158 true Chr2: 16940835-16943992 Arabidopsis thaliana
AT2G40570 0.5kb downstream 0.5kb downstream 500 false Chr2: 16943493-16943992 Arabidopsis thaliana
AT2G40570 1.0kb upstream 1.0kb upstream 3658 true Chr2: 16939835-16943492 Arabidopsis thaliana
AT2G40570 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16939835-16940834 Arabidopsis thaliana
AT2G40570 1.0kb downstream 1.0kb downstream 3658 true Chr2: 16940835-16944492 Arabidopsis thaliana
AT2G40570 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16943493-16944492 Arabidopsis thaliana
AT2G40570 2.0kb upstream 2.0kb upstream 4658 true Chr2: 16938835-16943492 Arabidopsis thaliana
AT2G40570 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16938835-16940834 Arabidopsis thaliana
AT2G40570 2.0kb downstream 2.0kb downstream 4658 true Chr2: 16940835-16945492 Arabidopsis thaliana
AT2G40570 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16943493-16945492 Arabidopsis thaliana
AT2G40570 5.0kb upstream 5.0kb upstream 7658 true Chr2: 16935835-16943492 Arabidopsis thaliana
AT2G40570 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16935835-16940834 Arabidopsis thaliana
AT2G40570 5.0kb downstream 5.0kb downstream 7658 true Chr2: 16940835-16948492 Arabidopsis thaliana
AT2G40570 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16943493-16948492 Arabidopsis thaliana
AT2G40570 10.0kb upstream 10.0kb upstream 12658 true Chr2: 16930835-16943492 Arabidopsis thaliana
AT2G40570 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16930835-16940834 Arabidopsis thaliana
AT2G40570 10.0kb downstream 10.0kb downstream 12658 true Chr2: 16940835-16953492 Arabidopsis thaliana
AT2G40570 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16943493-16953492 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361083 5261 Brassicaceae View MSA
123832891 5264 Brassicales-Malvales View MSA
124340043 5266 SBM View MSA
124241485 5268 Malvidae View MSA
124064987 5270 Rosid View MSA
123736577 5271 Pentapetalae View MSA
122790906 5272 Eudicot View MSA
122043011 5273 Angiosperm View MSA
121346582 5274 Embryophyte View MSA
123424647 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.339        
cufflinks 1.789        
cufflinks 2.574       High
cufflinks 1.602       Low
cufflinks 2.092        
cufflinks 1.904        

0 Strain