Gene : AT2G34080 A. thaliana TAIR10
Defline:  (1 of 7) 3.4.22.33 - Fruit bromelain Genomic Order:  2736
Name:  ? AT2G34080 Secondary Identifier:  ? PAC:19639349
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G34080 0.5kb upstream 0.5kb upstream 2178 true Chr2: 14393181-14395358 Arabidopsis thaliana
AT2G34080 0.5kb upstream 0.5kb upstream 500 false Chr2: 14394859-14395358 Arabidopsis thaliana
AT2G34080 0.5kb downstream 0.5kb downstream 2178 true Chr2: 14392681-14394858 Arabidopsis thaliana
AT2G34080 0.5kb downstream 0.5kb downstream 500 false Chr2: 14392681-14393180 Arabidopsis thaliana
AT2G34080 1.0kb upstream 1.0kb upstream 2678 true Chr2: 14393181-14395858 Arabidopsis thaliana
AT2G34080 1.0kb upstream 1.0kb upstream 1000 false Chr2: 14394859-14395858 Arabidopsis thaliana
AT2G34080 1.0kb downstream 1.0kb downstream 2678 true Chr2: 14392181-14394858 Arabidopsis thaliana
AT2G34080 1.0kb downstream 1.0kb downstream 1000 false Chr2: 14392181-14393180 Arabidopsis thaliana
AT2G34080 2.0kb upstream 2.0kb upstream 3678 true Chr2: 14393181-14396858 Arabidopsis thaliana
AT2G34080 2.0kb upstream 2.0kb upstream 2000 false Chr2: 14394859-14396858 Arabidopsis thaliana
AT2G34080 2.0kb downstream 2.0kb downstream 3678 true Chr2: 14391181-14394858 Arabidopsis thaliana
AT2G34080 2.0kb downstream 2.0kb downstream 2000 false Chr2: 14391181-14393180 Arabidopsis thaliana
AT2G34080 5.0kb upstream 5.0kb upstream 6678 true Chr2: 14393181-14399858 Arabidopsis thaliana
AT2G34080 5.0kb upstream 5.0kb upstream 5000 false Chr2: 14394859-14399858 Arabidopsis thaliana
AT2G34080 5.0kb downstream 5.0kb downstream 6678 true Chr2: 14388181-14394858 Arabidopsis thaliana
AT2G34080 5.0kb downstream 5.0kb downstream 5000 false Chr2: 14388181-14393180 Arabidopsis thaliana
AT2G34080 10.0kb upstream 10.0kb upstream 11678 true Chr2: 14393181-14404858 Arabidopsis thaliana
AT2G34080 10.0kb upstream 10.0kb upstream 10000 false Chr2: 14394859-14404858 Arabidopsis thaliana
AT2G34080 10.0kb downstream 10.0kb downstream 11678 true Chr2: 14383181-14394858 Arabidopsis thaliana
AT2G34080 10.0kb downstream 10.0kb downstream 10000 false Chr2: 14383181-14393180 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361781 5261 Brassicaceae View MSA
123841573 5264 Brassicales-Malvales View MSA
124341900 5266 SBM View MSA
124254446 5268 Malvidae View MSA
124074647 5270 Rosid View MSA
123752467 5271 Pentapetalae View MSA
122797682 5272 Eudicot View MSA
122051193 5273 Angiosperm View MSA
121348840 5274 Embryophyte View MSA
123426788 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.043     Low  
cufflinks 0.036     Low  
cufflinks 0.043     Low  
cufflinks 0.023     Low Low
cufflinks 0.035     Low  
cufflinks 0.049     Low High

0 Strain