Gene : LHB1B1 A. thaliana TAIR10
Primary Identifier:  ? AT2G34430 Defline:  (1 of 5) K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1)
Genomic Order:  2777 Name:  ? AT2G34430
Secondary Identifier:  ? PAC:19638127
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G34430 0.5kb upstream 0.5kb upstream 1508 true Chr2: 14524256-14525763 Arabidopsis thaliana
AT2G34430 0.5kb upstream 0.5kb upstream 500 false Chr2: 14524256-14524755 Arabidopsis thaliana
AT2G34430 0.5kb downstream 0.5kb downstream 1508 true Chr2: 14524756-14526263 Arabidopsis thaliana
AT2G34430 0.5kb downstream 0.5kb downstream 500 false Chr2: 14525764-14526263 Arabidopsis thaliana
AT2G34430 1.0kb upstream 1.0kb upstream 2008 true Chr2: 14523756-14525763 Arabidopsis thaliana
AT2G34430 1.0kb upstream 1.0kb upstream 1000 false Chr2: 14523756-14524755 Arabidopsis thaliana
AT2G34430 1.0kb downstream 1.0kb downstream 2008 true Chr2: 14524756-14526763 Arabidopsis thaliana
AT2G34430 1.0kb downstream 1.0kb downstream 1000 false Chr2: 14525764-14526763 Arabidopsis thaliana
AT2G34430 2.0kb upstream 2.0kb upstream 3008 true Chr2: 14522756-14525763 Arabidopsis thaliana
AT2G34430 2.0kb upstream 2.0kb upstream 2000 false Chr2: 14522756-14524755 Arabidopsis thaliana
AT2G34430 2.0kb downstream 2.0kb downstream 3008 true Chr2: 14524756-14527763 Arabidopsis thaliana
AT2G34430 2.0kb downstream 2.0kb downstream 2000 false Chr2: 14525764-14527763 Arabidopsis thaliana
AT2G34430 5.0kb upstream 5.0kb upstream 6008 true Chr2: 14519756-14525763 Arabidopsis thaliana
AT2G34430 5.0kb upstream 5.0kb upstream 5000 false Chr2: 14519756-14524755 Arabidopsis thaliana
AT2G34430 5.0kb downstream 5.0kb downstream 6008 true Chr2: 14524756-14530763 Arabidopsis thaliana
AT2G34430 5.0kb downstream 5.0kb downstream 5000 false Chr2: 14525764-14530763 Arabidopsis thaliana
AT2G34430 10.0kb upstream 10.0kb upstream 11008 true Chr2: 14514756-14525763 Arabidopsis thaliana
AT2G34430 10.0kb upstream 10.0kb upstream 10000 false Chr2: 14514756-14524755 Arabidopsis thaliana
AT2G34430 10.0kb downstream 10.0kb downstream 11008 true Chr2: 14524756-14535763 Arabidopsis thaliana
AT2G34430 10.0kb downstream 10.0kb downstream 10000 false Chr2: 14525764-14535763 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378096 5261 Brassicaceae View MSA
123837903 5264 Brassicales-Malvales View MSA
124347417 5266 SBM View MSA
124244902 5268 Malvidae View MSA
124072480 5270 Rosid View MSA
123751711 5271 Pentapetalae View MSA
122794402 5272 Eudicot View MSA
122050341 5273 Angiosperm View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 554.484     High  
cufflinks 0.347       Low
cufflinks 2676.587     High High
cufflinks 0.667        
cufflinks 1954.128     High  
cufflinks 0.634        

0 Strain