Gene : NF-YA4 A. thaliana TAIR10
Primary Identifier:  ? AT2G34720 Defline:  (1 of 10) K08064 - nuclear transcription factor Y, alpha (NFYA)
Genomic Order:  2808 Name:  ? AT2G34720
Secondary Identifier:  ? PAC:19640368
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G34720 0.5kb upstream 0.5kb upstream 2361 true Chr2: 14649767-14652127 Arabidopsis thaliana
AT2G34720 0.5kb upstream 0.5kb upstream 500 false Chr2: 14651628-14652127 Arabidopsis thaliana
AT2G34720 0.5kb downstream 0.5kb downstream 2361 true Chr2: 14649267-14651627 Arabidopsis thaliana
AT2G34720 0.5kb downstream 0.5kb downstream 500 false Chr2: 14649267-14649766 Arabidopsis thaliana
AT2G34720 1.0kb upstream 1.0kb upstream 2861 true Chr2: 14649767-14652627 Arabidopsis thaliana
AT2G34720 1.0kb upstream 1.0kb upstream 1000 false Chr2: 14651628-14652627 Arabidopsis thaliana
AT2G34720 1.0kb downstream 1.0kb downstream 2861 true Chr2: 14648767-14651627 Arabidopsis thaliana
AT2G34720 1.0kb downstream 1.0kb downstream 1000 false Chr2: 14648767-14649766 Arabidopsis thaliana
AT2G34720 2.0kb upstream 2.0kb upstream 3861 true Chr2: 14649767-14653627 Arabidopsis thaliana
AT2G34720 2.0kb upstream 2.0kb upstream 2000 false Chr2: 14651628-14653627 Arabidopsis thaliana
AT2G34720 2.0kb downstream 2.0kb downstream 3861 true Chr2: 14647767-14651627 Arabidopsis thaliana
AT2G34720 2.0kb downstream 2.0kb downstream 2000 false Chr2: 14647767-14649766 Arabidopsis thaliana
AT2G34720 5.0kb upstream 5.0kb upstream 6861 true Chr2: 14649767-14656627 Arabidopsis thaliana
AT2G34720 5.0kb upstream 5.0kb upstream 5000 false Chr2: 14651628-14656627 Arabidopsis thaliana
AT2G34720 5.0kb downstream 5.0kb downstream 6861 true Chr2: 14644767-14651627 Arabidopsis thaliana
AT2G34720 5.0kb downstream 5.0kb downstream 5000 false Chr2: 14644767-14649766 Arabidopsis thaliana
AT2G34720 10.0kb upstream 10.0kb upstream 11861 true Chr2: 14649767-14661627 Arabidopsis thaliana
AT2G34720 10.0kb upstream 10.0kb upstream 10000 false Chr2: 14651628-14661627 Arabidopsis thaliana
AT2G34720 10.0kb downstream 10.0kb downstream 11861 true Chr2: 14639767-14651627 Arabidopsis thaliana
AT2G34720 10.0kb downstream 10.0kb downstream 10000 false Chr2: 14639767-14649766 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366065 5261 Brassicaceae View MSA
123799100 5264 Brassicales-Malvales View MSA
124349978 5266 SBM View MSA
124254545 5268 Malvidae View MSA
124071541 5270 Rosid View MSA
123747394 5271 Pentapetalae View MSA
122791430 5272 Eudicot View MSA
122049545 5273 Angiosperm View MSA
121349728 5274 Embryophyte View MSA
123424382 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.719       Low
cufflinks 14.027        
cufflinks 9.217        
cufflinks 15.736       High
cufflinks 11.147        
cufflinks 12.095        

0 Strain