Gene : CNGC12 A. thaliana TAIR10
Primary Identifier:  ? AT2G46450 Defline:  (1 of 5) PTHR10217//PTHR10217:SF465 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 11-RELATED
Genomic Order:  4064 Name:  ? AT2G46450
Secondary Identifier:  ? PAC:19642274
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G46450 0.5kb upstream 0.5kb upstream 4354 true Chr2: 19065216-19069569 Arabidopsis thaliana
AT2G46450 0.5kb upstream 0.5kb upstream 500 false Chr2: 19065216-19065715 Arabidopsis thaliana
AT2G46450 0.5kb downstream 0.5kb downstream 4354 true Chr2: 19065716-19070069 Arabidopsis thaliana
AT2G46450 0.5kb downstream 0.5kb downstream 500 false Chr2: 19069570-19070069 Arabidopsis thaliana
AT2G46450 1.0kb upstream 1.0kb upstream 4854 true Chr2: 19064716-19069569 Arabidopsis thaliana
AT2G46450 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19064716-19065715 Arabidopsis thaliana
AT2G46450 1.0kb downstream 1.0kb downstream 4854 true Chr2: 19065716-19070569 Arabidopsis thaliana
AT2G46450 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19069570-19070569 Arabidopsis thaliana
AT2G46450 2.0kb upstream 2.0kb upstream 5854 true Chr2: 19063716-19069569 Arabidopsis thaliana
AT2G46450 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19063716-19065715 Arabidopsis thaliana
AT2G46450 2.0kb downstream 2.0kb downstream 5854 true Chr2: 19065716-19071569 Arabidopsis thaliana
AT2G46450 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19069570-19071569 Arabidopsis thaliana
AT2G46450 5.0kb upstream 5.0kb upstream 8854 true Chr2: 19060716-19069569 Arabidopsis thaliana
AT2G46450 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19060716-19065715 Arabidopsis thaliana
AT2G46450 5.0kb downstream 5.0kb downstream 8854 true Chr2: 19065716-19074569 Arabidopsis thaliana
AT2G46450 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19069570-19074569 Arabidopsis thaliana
AT2G46450 10.0kb upstream 10.0kb upstream 13854 true Chr2: 19055716-19069569 Arabidopsis thaliana
AT2G46450 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19055716-19065715 Arabidopsis thaliana
AT2G46450 10.0kb downstream 10.0kb downstream 13854 true Chr2: 19065716-19079569 Arabidopsis thaliana
AT2G46450 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19069570-19079569 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510204 5273 Angiosperm View MSA
122360543 5261 Brassicaceae View MSA
123797972 5264 Brassicales-Malvales View MSA
124295665 5266 SBM View MSA
124148041 5268 Malvidae View MSA
123874124 5270 Rosid View MSA
123458143 5271 Pentapetalae View MSA
122493554 5272 Eudicot View MSA
120783314 5274 Embryophyte View MSA
122825338 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.435        
cufflinks 3.569        
cufflinks 4.018        
cufflinks 3.897        
cufflinks 4.576        
cufflinks 2.737       Low

0 Strain