Gene : TLP3 A. thaliana TAIR10
Primary Identifier:  ? AT2G47900 Defline:  (1 of 1) PTHR16517//PTHR16517:SF34 - TUBBY-RELATED // SUBFAMILY NOT NAMED
Genomic Order:  4219 Name:  ? AT2G47900
Secondary Identifier:  ? PAC:19641669
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G47900 0.5kb upstream 0.5kb upstream 2810 true Chr2: 19610923-19613732 Arabidopsis thaliana
AT2G47900 0.5kb upstream 0.5kb upstream 500 false Chr2: 19613233-19613732 Arabidopsis thaliana
AT2G47900 0.5kb downstream 0.5kb downstream 2810 true Chr2: 19610423-19613232 Arabidopsis thaliana
AT2G47900 0.5kb downstream 0.5kb downstream 500 false Chr2: 19610423-19610922 Arabidopsis thaliana
AT2G47900 1.0kb upstream 1.0kb upstream 3310 true Chr2: 19610923-19614232 Arabidopsis thaliana
AT2G47900 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19613233-19614232 Arabidopsis thaliana
AT2G47900 1.0kb downstream 1.0kb downstream 3310 true Chr2: 19609923-19613232 Arabidopsis thaliana
AT2G47900 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19609923-19610922 Arabidopsis thaliana
AT2G47900 2.0kb upstream 2.0kb upstream 4310 true Chr2: 19610923-19615232 Arabidopsis thaliana
AT2G47900 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19613233-19615232 Arabidopsis thaliana
AT2G47900 2.0kb downstream 2.0kb downstream 4310 true Chr2: 19608923-19613232 Arabidopsis thaliana
AT2G47900 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19608923-19610922 Arabidopsis thaliana
AT2G47900 5.0kb upstream 5.0kb upstream 7310 true Chr2: 19610923-19618232 Arabidopsis thaliana
AT2G47900 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19613233-19618232 Arabidopsis thaliana
AT2G47900 5.0kb downstream 5.0kb downstream 7310 true Chr2: 19605923-19613232 Arabidopsis thaliana
AT2G47900 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19605923-19610922 Arabidopsis thaliana
AT2G47900 10.0kb upstream 10.0kb upstream 12310 true Chr2: 19610923-19623232 Arabidopsis thaliana
AT2G47900 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19613233-19623232 Arabidopsis thaliana
AT2G47900 10.0kb downstream 10.0kb downstream 12310 true Chr2: 19600923-19613232 Arabidopsis thaliana
AT2G47900 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19600923-19610922 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373319 5261 Brassicaceae View MSA
123829309 5264 Brassicales-Malvales View MSA
124344350 5266 SBM View MSA
124250131 5268 Malvidae View MSA
124069789 5270 Rosid View MSA
123743199 5271 Pentapetalae View MSA
122785867 5272 Eudicot View MSA
122047610 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.954        
cufflinks 9.831        
cufflinks 6.703        
cufflinks 10.827       High
cufflinks 6.867        
cufflinks 10.762       High

0 Strain