Gene : AT2G47850 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 Genomic Order:  4214
Name:  ? AT2G47850 Secondary Identifier:  ? PAC:19639510
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G47850 0.5kb upstream 0.5kb upstream 3442 true Chr2: 19595140-19598581 Arabidopsis thaliana
AT2G47850 0.5kb upstream 0.5kb upstream 500 false Chr2: 19595140-19595639 Arabidopsis thaliana
AT2G47850 0.5kb downstream 0.5kb downstream 3442 true Chr2: 19595640-19599081 Arabidopsis thaliana
AT2G47850 0.5kb downstream 0.5kb downstream 500 false Chr2: 19598582-19599081 Arabidopsis thaliana
AT2G47850 1.0kb upstream 1.0kb upstream 3942 true Chr2: 19594640-19598581 Arabidopsis thaliana
AT2G47850 1.0kb upstream 1.0kb upstream 1000 false Chr2: 19594640-19595639 Arabidopsis thaliana
AT2G47850 1.0kb downstream 1.0kb downstream 3942 true Chr2: 19595640-19599581 Arabidopsis thaliana
AT2G47850 1.0kb downstream 1.0kb downstream 1000 false Chr2: 19598582-19599581 Arabidopsis thaliana
AT2G47850 2.0kb upstream 2.0kb upstream 4942 true Chr2: 19593640-19598581 Arabidopsis thaliana
AT2G47850 2.0kb upstream 2.0kb upstream 2000 false Chr2: 19593640-19595639 Arabidopsis thaliana
AT2G47850 2.0kb downstream 2.0kb downstream 4942 true Chr2: 19595640-19600581 Arabidopsis thaliana
AT2G47850 2.0kb downstream 2.0kb downstream 2000 false Chr2: 19598582-19600581 Arabidopsis thaliana
AT2G47850 5.0kb upstream 5.0kb upstream 7942 true Chr2: 19590640-19598581 Arabidopsis thaliana
AT2G47850 5.0kb upstream 5.0kb upstream 5000 false Chr2: 19590640-19595639 Arabidopsis thaliana
AT2G47850 5.0kb downstream 5.0kb downstream 7942 true Chr2: 19595640-19603581 Arabidopsis thaliana
AT2G47850 5.0kb downstream 5.0kb downstream 5000 false Chr2: 19598582-19603581 Arabidopsis thaliana
AT2G47850 10.0kb upstream 10.0kb upstream 12942 true Chr2: 19585640-19598581 Arabidopsis thaliana
AT2G47850 10.0kb upstream 10.0kb upstream 10000 false Chr2: 19585640-19595639 Arabidopsis thaliana
AT2G47850 10.0kb downstream 10.0kb downstream 12942 true Chr2: 19595640-19608581 Arabidopsis thaliana
AT2G47850 10.0kb downstream 10.0kb downstream 10000 false Chr2: 19598582-19608581 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376520 5261 Brassicaceae View MSA
123832844 5264 Brassicales-Malvales View MSA
124342134 5266 SBM View MSA
124244303 5268 Malvidae View MSA
124067550 5270 Rosid View MSA
123744016 5271 Pentapetalae View MSA
122797715 5272 Eudicot View MSA
122047734 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.265       Low
cufflinks 5.832       High
cufflinks 3.642        
cufflinks 5.493        
cufflinks 3.472        
cufflinks 5.437        

0 Strain