Gene : PAR1 A. thaliana TAIR10
Primary Identifier:  ? AT2G42870 Defline:  (1 of 2) PTHR33124//PTHR33124:SF3 - FAMILY NOT NAMED // EXPRESSED PROTEIN
Genomic Order:  3686 Name:  ? AT2G42870
Secondary Identifier:  ? PAC:19640511
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G42870 0.5kb upstream 0.5kb upstream 1335 true Chr2: 17836416-17837750 Arabidopsis thaliana
AT2G42870 0.5kb upstream 0.5kb upstream 500 false Chr2: 17837251-17837750 Arabidopsis thaliana
AT2G42870 0.5kb downstream 0.5kb downstream 1335 true Chr2: 17835916-17837250 Arabidopsis thaliana
AT2G42870 0.5kb downstream 0.5kb downstream 500 false Chr2: 17835916-17836415 Arabidopsis thaliana
AT2G42870 1.0kb upstream 1.0kb upstream 1835 true Chr2: 17836416-17838250 Arabidopsis thaliana
AT2G42870 1.0kb upstream 1.0kb upstream 1000 false Chr2: 17837251-17838250 Arabidopsis thaliana
AT2G42870 1.0kb downstream 1.0kb downstream 1835 true Chr2: 17835416-17837250 Arabidopsis thaliana
AT2G42870 1.0kb downstream 1.0kb downstream 1000 false Chr2: 17835416-17836415 Arabidopsis thaliana
AT2G42870 2.0kb upstream 2.0kb upstream 2835 true Chr2: 17836416-17839250 Arabidopsis thaliana
AT2G42870 2.0kb upstream 2.0kb upstream 2000 false Chr2: 17837251-17839250 Arabidopsis thaliana
AT2G42870 2.0kb downstream 2.0kb downstream 2835 true Chr2: 17834416-17837250 Arabidopsis thaliana
AT2G42870 2.0kb downstream 2.0kb downstream 2000 false Chr2: 17834416-17836415 Arabidopsis thaliana
AT2G42870 5.0kb upstream 5.0kb upstream 5835 true Chr2: 17836416-17842250 Arabidopsis thaliana
AT2G42870 5.0kb upstream 5.0kb upstream 5000 false Chr2: 17837251-17842250 Arabidopsis thaliana
AT2G42870 5.0kb downstream 5.0kb downstream 5835 true Chr2: 17831416-17837250 Arabidopsis thaliana
AT2G42870 5.0kb downstream 5.0kb downstream 5000 false Chr2: 17831416-17836415 Arabidopsis thaliana
AT2G42870 10.0kb upstream 10.0kb upstream 10835 true Chr2: 17836416-17847250 Arabidopsis thaliana
AT2G42870 10.0kb upstream 10.0kb upstream 10000 false Chr2: 17837251-17847250 Arabidopsis thaliana
AT2G42870 10.0kb downstream 10.0kb downstream 10835 true Chr2: 17826416-17837250 Arabidopsis thaliana
AT2G42870 10.0kb downstream 10.0kb downstream 10000 false Chr2: 17826416-17836415 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365747 5261 Brassicaceae View MSA
123839197 5264 Brassicales-Malvales View MSA
124350686 5266 SBM View MSA
124249544 5268 Malvidae View MSA
124069551 5270 Rosid View MSA
123741178 5271 Pentapetalae View MSA
122787823 5272 Eudicot View MSA
122051668 5273 Angiosperm View MSA
121312606 5274 Embryophyte View MSA
123349763 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.683        
cufflinks 3.833       Low
cufflinks 36.259     High High
cufflinks 5.713        
cufflinks 30.699     High High
cufflinks 5.11        

0 Strain