Gene : TRN1 A. thaliana TAIR10
Primary Identifier:  ? AT2G16950 Defline:  (1 of 2) K18752 - transportin-1 (TNPO1)
Genomic Order:  919 Name:  ? AT2G16950
Secondary Identifier:  ? PAC:19641367
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G16950 0.5kb upstream 0.5kb upstream 7856 true Chr2: 7353347-7361202 Arabidopsis thaliana
AT2G16950 0.5kb upstream 0.5kb upstream 500 false Chr2: 7353347-7353846 Arabidopsis thaliana
AT2G16950 0.5kb downstream 0.5kb downstream 7856 true Chr2: 7353847-7361702 Arabidopsis thaliana
AT2G16950 0.5kb downstream 0.5kb downstream 500 false Chr2: 7361203-7361702 Arabidopsis thaliana
AT2G16950 1.0kb upstream 1.0kb upstream 8356 true Chr2: 7352847-7361202 Arabidopsis thaliana
AT2G16950 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7352847-7353846 Arabidopsis thaliana
AT2G16950 1.0kb downstream 1.0kb downstream 8356 true Chr2: 7353847-7362202 Arabidopsis thaliana
AT2G16950 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7361203-7362202 Arabidopsis thaliana
AT2G16950 2.0kb upstream 2.0kb upstream 9356 true Chr2: 7351847-7361202 Arabidopsis thaliana
AT2G16950 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7351847-7353846 Arabidopsis thaliana
AT2G16950 2.0kb downstream 2.0kb downstream 9356 true Chr2: 7353847-7363202 Arabidopsis thaliana
AT2G16950 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7361203-7363202 Arabidopsis thaliana
AT2G16950 5.0kb upstream 5.0kb upstream 12356 true Chr2: 7348847-7361202 Arabidopsis thaliana
AT2G16950 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7348847-7353846 Arabidopsis thaliana
AT2G16950 5.0kb downstream 5.0kb downstream 12356 true Chr2: 7353847-7366202 Arabidopsis thaliana
AT2G16950 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7361203-7366202 Arabidopsis thaliana
AT2G16950 10.0kb upstream 10.0kb upstream 17356 true Chr2: 7343847-7361202 Arabidopsis thaliana
AT2G16950 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7343847-7353846 Arabidopsis thaliana
AT2G16950 10.0kb downstream 10.0kb downstream 17356 true Chr2: 7353847-7371202 Arabidopsis thaliana
AT2G16950 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7361203-7371202 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026329 5273 Angiosperm View MSA
122376283 5261 Brassicaceae View MSA
123829737 5264 Brassicales-Malvales View MSA
124344998 5266 SBM View MSA
124237948 5268 Malvidae View MSA
124064274 5270 Rosid View MSA
123739927 5271 Pentapetalae View MSA
122787120 5272 Eudicot View MSA
121344720 5274 Embryophyte View MSA
123426345 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.677        
cufflinks 6.531        
cufflinks 3.956       Low
cufflinks 6.315        
cufflinks 4.163       Low
cufflinks 7.042       High

0 Strain