Gene : CPK6 A. thaliana TAIR10
Primary Identifier:  ? AT2G17290 Defline:  (1 of 2) PTHR24349//PTHR24349:SF83 - SERINE/THREONINE-PROTEIN KINASE // CALCIUM-DEPENDENT PROTEIN KINASE 6
Genomic Order:  958 Name:  ? AT2G17290
Secondary Identifier:  ? PAC:19640449
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G17290 0.5kb upstream 0.5kb upstream 3719 true Chr2: 7515915-7519633 Arabidopsis thaliana
AT2G17290 0.5kb upstream 0.5kb upstream 500 false Chr2: 7515915-7516414 Arabidopsis thaliana
AT2G17290 0.5kb downstream 0.5kb downstream 3719 true Chr2: 7516415-7520133 Arabidopsis thaliana
AT2G17290 0.5kb downstream 0.5kb downstream 500 false Chr2: 7519634-7520133 Arabidopsis thaliana
AT2G17290 1.0kb upstream 1.0kb upstream 4219 true Chr2: 7515415-7519633 Arabidopsis thaliana
AT2G17290 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7515415-7516414 Arabidopsis thaliana
AT2G17290 1.0kb downstream 1.0kb downstream 4219 true Chr2: 7516415-7520633 Arabidopsis thaliana
AT2G17290 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7519634-7520633 Arabidopsis thaliana
AT2G17290 2.0kb upstream 2.0kb upstream 5219 true Chr2: 7514415-7519633 Arabidopsis thaliana
AT2G17290 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7514415-7516414 Arabidopsis thaliana
AT2G17290 2.0kb downstream 2.0kb downstream 5219 true Chr2: 7516415-7521633 Arabidopsis thaliana
AT2G17290 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7519634-7521633 Arabidopsis thaliana
AT2G17290 5.0kb upstream 5.0kb upstream 8219 true Chr2: 7511415-7519633 Arabidopsis thaliana
AT2G17290 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7511415-7516414 Arabidopsis thaliana
AT2G17290 5.0kb downstream 5.0kb downstream 8219 true Chr2: 7516415-7524633 Arabidopsis thaliana
AT2G17290 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7519634-7524633 Arabidopsis thaliana
AT2G17290 10.0kb upstream 10.0kb upstream 13219 true Chr2: 7506415-7519633 Arabidopsis thaliana
AT2G17290 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7506415-7516414 Arabidopsis thaliana
AT2G17290 10.0kb downstream 10.0kb downstream 13219 true Chr2: 7516415-7529633 Arabidopsis thaliana
AT2G17290 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7519634-7529633 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366889 5261 Brassicaceae View MSA
123836645 5264 Brassicales-Malvales View MSA
124343015 5266 SBM View MSA
124247953 5268 Malvidae View MSA
124064414 5270 Rosid View MSA
123746824 5271 Pentapetalae View MSA
122786151 5272 Eudicot View MSA
122046478 5273 Angiosperm View MSA
121350946 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.098        
cufflinks 52.587     High  
cufflinks 17.16       Low
cufflinks 51.767     High  
cufflinks 23.55        
cufflinks 53.266     High  

0 Strain