Gene : TLP2 A. thaliana TAIR10
Primary Identifier:  ? AT2G18280 Defline:  (1 of 4) PTHR16517//PTHR16517:SF40 - TUBBY-RELATED // TUBBY-LIKE F-BOX PROTEIN 11-RELATED
Genomic Order:  1065 Name:  ? AT2G18280
Secondary Identifier:  ? PAC:19640534
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G18280 0.5kb upstream 0.5kb upstream 2971 true Chr2: 7945498-7948468 Arabidopsis thaliana
AT2G18280 0.5kb upstream 0.5kb upstream 500 false Chr2: 7945498-7945997 Arabidopsis thaliana
AT2G18280 0.5kb downstream 0.5kb downstream 2971 true Chr2: 7945998-7948968 Arabidopsis thaliana
AT2G18280 0.5kb downstream 0.5kb downstream 500 false Chr2: 7948469-7948968 Arabidopsis thaliana
AT2G18280 1.0kb upstream 1.0kb upstream 3471 true Chr2: 7944998-7948468 Arabidopsis thaliana
AT2G18280 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7944998-7945997 Arabidopsis thaliana
AT2G18280 1.0kb downstream 1.0kb downstream 3471 true Chr2: 7945998-7949468 Arabidopsis thaliana
AT2G18280 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7948469-7949468 Arabidopsis thaliana
AT2G18280 2.0kb upstream 2.0kb upstream 4471 true Chr2: 7943998-7948468 Arabidopsis thaliana
AT2G18280 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7943998-7945997 Arabidopsis thaliana
AT2G18280 2.0kb downstream 2.0kb downstream 4471 true Chr2: 7945998-7950468 Arabidopsis thaliana
AT2G18280 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7948469-7950468 Arabidopsis thaliana
AT2G18280 5.0kb upstream 5.0kb upstream 7471 true Chr2: 7940998-7948468 Arabidopsis thaliana
AT2G18280 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7940998-7945997 Arabidopsis thaliana
AT2G18280 5.0kb downstream 5.0kb downstream 7471 true Chr2: 7945998-7953468 Arabidopsis thaliana
AT2G18280 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7948469-7953468 Arabidopsis thaliana
AT2G18280 10.0kb upstream 10.0kb upstream 12471 true Chr2: 7935998-7948468 Arabidopsis thaliana
AT2G18280 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7935998-7945997 Arabidopsis thaliana
AT2G18280 10.0kb downstream 10.0kb downstream 12471 true Chr2: 7945998-7958468 Arabidopsis thaliana
AT2G18280 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7948469-7958468 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370801 5261 Brassicaceae View MSA
123836461 5264 Brassicales-Malvales View MSA
124351543 5266 SBM View MSA
124237645 5268 Malvidae View MSA
124064248 5270 Rosid View MSA
123747341 5271 Pentapetalae View MSA
122790799 5272 Eudicot View MSA
122049170 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.05       Low
cufflinks 38.978     High  
cufflinks 28.854     High  
cufflinks 41.575     High High
cufflinks 29.497     High  
cufflinks 29.507     High  

0 Strain