Gene : XCT A. thaliana TAIR10
Primary Identifier:  ? AT2G21150 Defline:  (1 of 1) K13119 - protein FAM50 (FAM50, XAP5)
Genomic Order:  1371 Name:  ? AT2G21150
Secondary Identifier:  ? PAC:19642851
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G21150 0.5kb upstream 0.5kb upstream 3256 true Chr2: 9064838-9068093 Arabidopsis thaliana
AT2G21150 0.5kb upstream 0.5kb upstream 500 false Chr2: 9064838-9065337 Arabidopsis thaliana
AT2G21150 0.5kb downstream 0.5kb downstream 3256 true Chr2: 9065338-9068593 Arabidopsis thaliana
AT2G21150 0.5kb downstream 0.5kb downstream 500 false Chr2: 9068094-9068593 Arabidopsis thaliana
AT2G21150 1.0kb upstream 1.0kb upstream 3756 true Chr2: 9064338-9068093 Arabidopsis thaliana
AT2G21150 1.0kb upstream 1.0kb upstream 1000 false Chr2: 9064338-9065337 Arabidopsis thaliana
AT2G21150 1.0kb downstream 1.0kb downstream 3756 true Chr2: 9065338-9069093 Arabidopsis thaliana
AT2G21150 1.0kb downstream 1.0kb downstream 1000 false Chr2: 9068094-9069093 Arabidopsis thaliana
AT2G21150 2.0kb upstream 2.0kb upstream 4756 true Chr2: 9063338-9068093 Arabidopsis thaliana
AT2G21150 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9063338-9065337 Arabidopsis thaliana
AT2G21150 2.0kb downstream 2.0kb downstream 4756 true Chr2: 9065338-9070093 Arabidopsis thaliana
AT2G21150 2.0kb downstream 2.0kb downstream 2000 false Chr2: 9068094-9070093 Arabidopsis thaliana
AT2G21150 5.0kb upstream 5.0kb upstream 7756 true Chr2: 9060338-9068093 Arabidopsis thaliana
AT2G21150 5.0kb upstream 5.0kb upstream 5000 false Chr2: 9060338-9065337 Arabidopsis thaliana
AT2G21150 5.0kb downstream 5.0kb downstream 7756 true Chr2: 9065338-9073093 Arabidopsis thaliana
AT2G21150 5.0kb downstream 5.0kb downstream 5000 false Chr2: 9068094-9073093 Arabidopsis thaliana
AT2G21150 10.0kb upstream 10.0kb upstream 12756 true Chr2: 9055338-9068093 Arabidopsis thaliana
AT2G21150 10.0kb upstream 10.0kb upstream 10000 false Chr2: 9055338-9065337 Arabidopsis thaliana
AT2G21150 10.0kb downstream 10.0kb downstream 12756 true Chr2: 9065338-9078093 Arabidopsis thaliana
AT2G21150 10.0kb downstream 10.0kb downstream 10000 false Chr2: 9068094-9078093 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366153 5261 Brassicaceae View MSA
123828202 5264 Brassicales-Malvales View MSA
124350458 5266 SBM View MSA
124243513 5268 Malvidae View MSA
124065875 5270 Rosid View MSA
123737386 5271 Pentapetalae View MSA
122792820 5272 Eudicot View MSA
122044828 5273 Angiosperm View MSA
121346265 5274 Embryophyte View MSA
123426608 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.371       Low
cufflinks 9.164        
cufflinks 6.731        
cufflinks 10.924       High
cufflinks 6.978        
cufflinks 10.222        

0 Strain