Gene : GSL03 A. thaliana TAIR10
Primary Identifier:  ? AT2G31960 Defline:  (1 of 4) PTHR12741:SF9 - CALLOSE SYNTHASE 1-RELATED
Genomic Order:  2507 Name:  ? AT2G31960
Secondary Identifier:  ? PAC:19641743
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6773 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G31960 0.5kb upstream 0.5kb upstream 11843 true Chr2: 13588387-13600229 Arabidopsis thaliana
AT2G31960 0.5kb upstream 0.5kb upstream 500 false Chr2: 13588387-13588886 Arabidopsis thaliana
AT2G31960 0.5kb downstream 0.5kb downstream 11843 true Chr2: 13588887-13600729 Arabidopsis thaliana
AT2G31960 0.5kb downstream 0.5kb downstream 500 false Chr2: 13600230-13600729 Arabidopsis thaliana
AT2G31960 1.0kb upstream 1.0kb upstream 12343 true Chr2: 13587887-13600229 Arabidopsis thaliana
AT2G31960 1.0kb upstream 1.0kb upstream 1000 false Chr2: 13587887-13588886 Arabidopsis thaliana
AT2G31960 1.0kb downstream 1.0kb downstream 12343 true Chr2: 13588887-13601229 Arabidopsis thaliana
AT2G31960 1.0kb downstream 1.0kb downstream 1000 false Chr2: 13600230-13601229 Arabidopsis thaliana
AT2G31960 2.0kb upstream 2.0kb upstream 13343 true Chr2: 13586887-13600229 Arabidopsis thaliana
AT2G31960 2.0kb upstream 2.0kb upstream 2000 false Chr2: 13586887-13588886 Arabidopsis thaliana
AT2G31960 2.0kb downstream 2.0kb downstream 13343 true Chr2: 13588887-13602229 Arabidopsis thaliana
AT2G31960 2.0kb downstream 2.0kb downstream 2000 false Chr2: 13600230-13602229 Arabidopsis thaliana
AT2G31960 5.0kb upstream 5.0kb upstream 16343 true Chr2: 13583887-13600229 Arabidopsis thaliana
AT2G31960 5.0kb upstream 5.0kb upstream 5000 false Chr2: 13583887-13588886 Arabidopsis thaliana
AT2G31960 5.0kb downstream 5.0kb downstream 16343 true Chr2: 13588887-13605229 Arabidopsis thaliana
AT2G31960 5.0kb downstream 5.0kb downstream 5000 false Chr2: 13600230-13605229 Arabidopsis thaliana
AT2G31960 10.0kb upstream 10.0kb upstream 21343 true Chr2: 13578887-13600229 Arabidopsis thaliana
AT2G31960 10.0kb upstream 10.0kb upstream 10000 false Chr2: 13578887-13588886 Arabidopsis thaliana
AT2G31960 10.0kb downstream 10.0kb downstream 21343 true Chr2: 13588887-13610229 Arabidopsis thaliana
AT2G31960 10.0kb downstream 10.0kb downstream 10000 false Chr2: 13600230-13610229 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368152 5261 Brassicaceae View MSA
123839763 5264 Brassicales-Malvales View MSA
124346959 5266 SBM View MSA
124251802 5268 Malvidae View MSA
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.811        
cufflinks 12.009        
cufflinks 6.728        
cufflinks 14.045       High
cufflinks 6.909        
cufflinks 10.06        

0 Strain