Gene : CALS5 A. thaliana TAIR10
Primary Identifier:  ? AT2G13680 Defline:  (1 of 12) K11000 - callose synthase [EC:2.4.1.-] Glc b1-3 Glc (CALS)
Genomic Order:  678 Name:  ? AT2G13680
Secondary Identifier:  ? PAC:19638772
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6773 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G13680 0.5kb upstream 0.5kb upstream 12237 true Chr2: 5693898-5706134 Arabidopsis thaliana
AT2G13680 0.5kb upstream 0.5kb upstream 500 false Chr2: 5693898-5694397 Arabidopsis thaliana
AT2G13680 0.5kb downstream 0.5kb downstream 12237 true Chr2: 5694398-5706634 Arabidopsis thaliana
AT2G13680 0.5kb downstream 0.5kb downstream 500 false Chr2: 5706135-5706634 Arabidopsis thaliana
AT2G13680 1.0kb upstream 1.0kb upstream 12737 true Chr2: 5693398-5706134 Arabidopsis thaliana
AT2G13680 1.0kb upstream 1.0kb upstream 1000 false Chr2: 5693398-5694397 Arabidopsis thaliana
AT2G13680 1.0kb downstream 1.0kb downstream 12737 true Chr2: 5694398-5707134 Arabidopsis thaliana
AT2G13680 1.0kb downstream 1.0kb downstream 1000 false Chr2: 5706135-5707134 Arabidopsis thaliana
AT2G13680 2.0kb upstream 2.0kb upstream 13737 true Chr2: 5692398-5706134 Arabidopsis thaliana
AT2G13680 2.0kb upstream 2.0kb upstream 2000 false Chr2: 5692398-5694397 Arabidopsis thaliana
AT2G13680 2.0kb downstream 2.0kb downstream 13737 true Chr2: 5694398-5708134 Arabidopsis thaliana
AT2G13680 2.0kb downstream 2.0kb downstream 2000 false Chr2: 5706135-5708134 Arabidopsis thaliana
AT2G13680 5.0kb upstream 5.0kb upstream 16737 true Chr2: 5689398-5706134 Arabidopsis thaliana
AT2G13680 5.0kb upstream 5.0kb upstream 5000 false Chr2: 5689398-5694397 Arabidopsis thaliana
AT2G13680 5.0kb downstream 5.0kb downstream 16737 true Chr2: 5694398-5711134 Arabidopsis thaliana
AT2G13680 5.0kb downstream 5.0kb downstream 5000 false Chr2: 5706135-5711134 Arabidopsis thaliana
AT2G13680 10.0kb upstream 10.0kb upstream 21737 true Chr2: 5684398-5706134 Arabidopsis thaliana
AT2G13680 10.0kb upstream 10.0kb upstream 10000 false Chr2: 5684398-5694397 Arabidopsis thaliana
AT2G13680 10.0kb downstream 10.0kb downstream 21737 true Chr2: 5694398-5716134 Arabidopsis thaliana
AT2G13680 10.0kb downstream 10.0kb downstream 10000 false Chr2: 5706135-5716134 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361913 5261 Brassicaceae View MSA
123828093 5264 Brassicales-Malvales View MSA
124346230 5266 SBM View MSA
124240742 5268 Malvidae View MSA
124065172 5270 Rosid View MSA
123736428 5271 Pentapetalae View MSA
122796898 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.067     Low  
cufflinks 0.109     Low  
cufflinks 0.023     Low Low
cufflinks 0.048     Low  
cufflinks 0.024     Low Low
cufflinks 0.13     Low High

0 Strain