Gene : IAA8 A. thaliana TAIR10
Primary Identifier:  ? AT2G22670 Defline:  (1 of 1) PTHR31734//PTHR31734:SF18 - FAMILY NOT NAMED // AUXIN-RESPONSIVE PROTEIN IAA8
Genomic Order:  1526 Name:  ? AT2G22670
Secondary Identifier:  ? PAC:19641897
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G22670 0.5kb upstream 0.5kb upstream 2866 true Chr2: 9635880-9638745 Arabidopsis thaliana
AT2G22670 0.5kb upstream 0.5kb upstream 500 false Chr2: 9635880-9636379 Arabidopsis thaliana
AT2G22670 0.5kb downstream 0.5kb downstream 2866 true Chr2: 9636380-9639245 Arabidopsis thaliana
AT2G22670 0.5kb downstream 0.5kb downstream 500 false Chr2: 9638746-9639245 Arabidopsis thaliana
AT2G22670 1.0kb upstream 1.0kb upstream 3366 true Chr2: 9635380-9638745 Arabidopsis thaliana
AT2G22670 1.0kb upstream 1.0kb upstream 1000 false Chr2: 9635380-9636379 Arabidopsis thaliana
AT2G22670 1.0kb downstream 1.0kb downstream 3366 true Chr2: 9636380-9639745 Arabidopsis thaliana
AT2G22670 1.0kb downstream 1.0kb downstream 1000 false Chr2: 9638746-9639745 Arabidopsis thaliana
AT2G22670 2.0kb upstream 2.0kb upstream 4366 true Chr2: 9634380-9638745 Arabidopsis thaliana
AT2G22670 2.0kb upstream 2.0kb upstream 2000 false Chr2: 9634380-9636379 Arabidopsis thaliana
AT2G22670 2.0kb downstream 2.0kb downstream 4366 true Chr2: 9636380-9640745 Arabidopsis thaliana
AT2G22670 2.0kb downstream 2.0kb downstream 2000 false Chr2: 9638746-9640745 Arabidopsis thaliana
AT2G22670 5.0kb upstream 5.0kb upstream 7366 true Chr2: 9631380-9638745 Arabidopsis thaliana
AT2G22670 5.0kb upstream 5.0kb upstream 5000 false Chr2: 9631380-9636379 Arabidopsis thaliana
AT2G22670 5.0kb downstream 5.0kb downstream 7366 true Chr2: 9636380-9643745 Arabidopsis thaliana
AT2G22670 5.0kb downstream 5.0kb downstream 5000 false Chr2: 9638746-9643745 Arabidopsis thaliana
AT2G22670 10.0kb upstream 10.0kb upstream 12366 true Chr2: 9626380-9638745 Arabidopsis thaliana
AT2G22670 10.0kb upstream 10.0kb upstream 10000 false Chr2: 9626380-9636379 Arabidopsis thaliana
AT2G22670 10.0kb downstream 10.0kb downstream 12366 true Chr2: 9636380-9648745 Arabidopsis thaliana
AT2G22670 10.0kb downstream 10.0kb downstream 10000 false Chr2: 9638746-9648745 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377496 5261 Brassicaceae View MSA
123801547 5264 Brassicales-Malvales View MSA
124298837 5266 SBM View MSA
124247888 5268 Malvidae View MSA
124070814 5270 Rosid View MSA
123750768 5271 Pentapetalae View MSA
122791591 5272 Eudicot View MSA
122051273 5273 Angiosperm View MSA
121350717 5274 Embryophyte View MSA
123381856 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.084        
cufflinks 33.737     High  
cufflinks 16.915        
cufflinks 32.415     High  
cufflinks 14.068       Low
cufflinks 39.326     High High

0 Strain