Gene : EIF4A-2 A. thaliana TAIR10
Primary Identifier:  ? AT1G54270 Defline:  (1 of 3) K03257 - translation initiation factor 4A (EIF4A)
Genomic Order:  4482 Name:  ? AT1G54270
Secondary Identifier:  ? PAC:19651326
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G54270 0.5kb upstream 0.5kb upstream 3075 true Chr1: 20259192-20262266 Arabidopsis thaliana
AT1G54270 0.5kb upstream 0.5kb upstream 500 false Chr1: 20259192-20259691 Arabidopsis thaliana
AT1G54270 0.5kb downstream 0.5kb downstream 3075 true Chr1: 20259692-20262766 Arabidopsis thaliana
AT1G54270 0.5kb downstream 0.5kb downstream 500 false Chr1: 20262267-20262766 Arabidopsis thaliana
AT1G54270 1.0kb upstream 1.0kb upstream 3575 true Chr1: 20258692-20262266 Arabidopsis thaliana
AT1G54270 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20258692-20259691 Arabidopsis thaliana
AT1G54270 1.0kb downstream 1.0kb downstream 3575 true Chr1: 20259692-20263266 Arabidopsis thaliana
AT1G54270 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20262267-20263266 Arabidopsis thaliana
AT1G54270 2.0kb upstream 2.0kb upstream 4575 true Chr1: 20257692-20262266 Arabidopsis thaliana
AT1G54270 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20257692-20259691 Arabidopsis thaliana
AT1G54270 2.0kb downstream 2.0kb downstream 4575 true Chr1: 20259692-20264266 Arabidopsis thaliana
AT1G54270 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20262267-20264266 Arabidopsis thaliana
AT1G54270 5.0kb upstream 5.0kb upstream 7575 true Chr1: 20254692-20262266 Arabidopsis thaliana
AT1G54270 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20254692-20259691 Arabidopsis thaliana
AT1G54270 5.0kb downstream 5.0kb downstream 7575 true Chr1: 20259692-20267266 Arabidopsis thaliana
AT1G54270 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20262267-20267266 Arabidopsis thaliana
AT1G54270 10.0kb upstream 10.0kb upstream 12575 true Chr1: 20249692-20262266 Arabidopsis thaliana
AT1G54270 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20249692-20259691 Arabidopsis thaliana
AT1G54270 10.0kb downstream 10.0kb downstream 12575 true Chr1: 20259692-20272266 Arabidopsis thaliana
AT1G54270 10.0kb downstream 10.0kb downstream 10000 false Chr1: 20262267-20272266 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380727 5261 Brassicaceae View MSA
123838192 5264 Brassicales-Malvales View MSA
124346371 5266 SBM View MSA
124251046 5268 Malvidae View MSA
124071119 5270 Rosid View MSA
123753006 5271 Pentapetalae View MSA
122788239 5272 Eudicot View MSA
122046690 5273 Angiosperm View MSA
121345295 5274 Embryophyte View MSA
123427522 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.827        
cufflinks 27.831        
cufflinks 25.318        
cufflinks 32.403     High High
cufflinks 21.98       Low
cufflinks 33.939     High High

0 Strain