Gene : AT1G54320 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10926//PTHR10926:SF30 - CELL CYCLE CONTROL PROTEIN 50 // SUBFAMILY NOT NAMED Genomic Order:  4487
Name:  ? AT1G54320 Secondary Identifier:  ? PAC:19656376
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G54320 0.5kb upstream 0.5kb upstream 2924 true Chr1: 20275534-20278457 Arabidopsis thaliana
AT1G54320 0.5kb upstream 0.5kb upstream 500 false Chr1: 20277958-20278457 Arabidopsis thaliana
AT1G54320 0.5kb downstream 0.5kb downstream 2924 true Chr1: 20275034-20277957 Arabidopsis thaliana
AT1G54320 0.5kb downstream 0.5kb downstream 500 false Chr1: 20275034-20275533 Arabidopsis thaliana
AT1G54320 1.0kb upstream 1.0kb upstream 3424 true Chr1: 20275534-20278957 Arabidopsis thaliana
AT1G54320 1.0kb upstream 1.0kb upstream 1000 false Chr1: 20277958-20278957 Arabidopsis thaliana
AT1G54320 1.0kb downstream 1.0kb downstream 3424 true Chr1: 20274534-20277957 Arabidopsis thaliana
AT1G54320 1.0kb downstream 1.0kb downstream 1000 false Chr1: 20274534-20275533 Arabidopsis thaliana
AT1G54320 2.0kb upstream 2.0kb upstream 4424 true Chr1: 20275534-20279957 Arabidopsis thaliana
AT1G54320 2.0kb upstream 2.0kb upstream 2000 false Chr1: 20277958-20279957 Arabidopsis thaliana
AT1G54320 2.0kb downstream 2.0kb downstream 4424 true Chr1: 20273534-20277957 Arabidopsis thaliana
AT1G54320 2.0kb downstream 2.0kb downstream 2000 false Chr1: 20273534-20275533 Arabidopsis thaliana
AT1G54320 5.0kb upstream 5.0kb upstream 7424 true Chr1: 20275534-20282957 Arabidopsis thaliana
AT1G54320 5.0kb upstream 5.0kb upstream 5000 false Chr1: 20277958-20282957 Arabidopsis thaliana
AT1G54320 5.0kb downstream 5.0kb downstream 7424 true Chr1: 20270534-20277957 Arabidopsis thaliana
AT1G54320 5.0kb downstream 5.0kb downstream 5000 false Chr1: 20270534-20275533 Arabidopsis thaliana
AT1G54320 10.0kb upstream 10.0kb upstream 12424 true Chr1: 20275534-20287957 Arabidopsis thaliana
AT1G54320 10.0kb upstream 10.0kb upstream 10000 false Chr1: 20277958-20287957 Arabidopsis thaliana
AT1G54320 10.0kb downstream 10.0kb downstream 12424 true Chr1: 20265534-20277957 Arabidopsis thaliana
AT1G54320 10.0kb downstream 10.0kb downstream 10000 false Chr1: 20265534-20275533 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361643 5261 Brassicaceae View MSA
123840074 5264 Brassicales-Malvales View MSA
124340383 5266 SBM View MSA
124238626 5268 Malvidae View MSA
124071638 5270 Rosid View MSA
123747358 5271 Pentapetalae View MSA
122796482 5272 Eudicot View MSA
122050302 5273 Angiosperm View MSA
121349346 5274 Embryophyte View MSA
123425782 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.035     High  
cufflinks 45.07     High High
cufflinks 24.19       Low
cufflinks 43.568     High  
cufflinks 28.948     High  
cufflinks 38.871     High  

0 Strain