Gene : AT1G80320 A. thaliana TAIR10
Defline:  (1 of 3) PTHR10209//PTHR10209:SF174 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED Genomic Order:  7009
Name:  ? AT1G80320 Secondary Identifier:  ? PAC:19653466
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G80320 0.5kb upstream 0.5kb upstream 1615 true Chr1: 30196282-30197896 Arabidopsis thaliana
AT1G80320 0.5kb upstream 0.5kb upstream 500 false Chr1: 30196282-30196781 Arabidopsis thaliana
AT1G80320 0.5kb downstream 0.5kb downstream 1615 true Chr1: 30196782-30198396 Arabidopsis thaliana
AT1G80320 0.5kb downstream 0.5kb downstream 500 false Chr1: 30197897-30198396 Arabidopsis thaliana
AT1G80320 1.0kb upstream 1.0kb upstream 2115 true Chr1: 30195782-30197896 Arabidopsis thaliana
AT1G80320 1.0kb upstream 1.0kb upstream 1000 false Chr1: 30195782-30196781 Arabidopsis thaliana
AT1G80320 1.0kb downstream 1.0kb downstream 2115 true Chr1: 30196782-30198896 Arabidopsis thaliana
AT1G80320 1.0kb downstream 1.0kb downstream 1000 false Chr1: 30197897-30198896 Arabidopsis thaliana
AT1G80320 2.0kb upstream 2.0kb upstream 3115 true Chr1: 30194782-30197896 Arabidopsis thaliana
AT1G80320 2.0kb upstream 2.0kb upstream 2000 false Chr1: 30194782-30196781 Arabidopsis thaliana
AT1G80320 2.0kb downstream 2.0kb downstream 3115 true Chr1: 30196782-30199896 Arabidopsis thaliana
AT1G80320 2.0kb downstream 2.0kb downstream 2000 false Chr1: 30197897-30199896 Arabidopsis thaliana
AT1G80320 5.0kb upstream 5.0kb upstream 6115 true Chr1: 30191782-30197896 Arabidopsis thaliana
AT1G80320 5.0kb upstream 5.0kb upstream 5000 false Chr1: 30191782-30196781 Arabidopsis thaliana
AT1G80320 5.0kb downstream 5.0kb downstream 6115 true Chr1: 30196782-30202896 Arabidopsis thaliana
AT1G80320 5.0kb downstream 5.0kb downstream 5000 false Chr1: 30197897-30202896 Arabidopsis thaliana
AT1G80320 10.0kb upstream 10.0kb upstream 11115 true Chr1: 30186782-30197896 Arabidopsis thaliana
AT1G80320 10.0kb upstream 10.0kb upstream 10000 false Chr1: 30186782-30196781 Arabidopsis thaliana
AT1G80320 10.0kb downstream 10.0kb downstream 11115 true Chr1: 30196782-30207896 Arabidopsis thaliana
AT1G80320 10.0kb downstream 10.0kb downstream 10000 false Chr1: 30197897-30207896 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363643 5261 Brassicaceae View MSA
123798586 5264 Brassicales-Malvales View MSA
124346980 5266 SBM View MSA
124247987 5268 Malvidae View MSA
124071361 5270 Rosid View MSA
123745287 5271 Pentapetalae View MSA
122794862 5272 Eudicot View MSA
122049983 5273 Angiosperm View MSA
121351824 5274 Embryophyte View MSA
123382352 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.582        
cufflinks 2.513        
cufflinks 1.045       Low
cufflinks 8.863       High
cufflinks 1.349        
cufflinks 5.602        

0 Strain