Gene : PAP1 A. thaliana TAIR10
Primary Identifier:  ? AT2G01180 Defline:  (1 of 3) PTHR10165//PTHR10165:SF80 - LIPID PHOSPHATE PHOSPHATASE // LIPID PHOSPHATE PHOSPHATASE 1-RELATED
Genomic Order:  17 Name:  ? AT2G01180
Secondary Identifier:  ? PAC:19639572
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana TRIGLSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G01180 0.5kb upstream 0.5kb upstream 2404 true Chr2: 106900-109303 Arabidopsis thaliana
AT2G01180 0.5kb upstream 0.5kb upstream 500 false Chr2: 108804-109303 Arabidopsis thaliana
AT2G01180 0.5kb downstream 0.5kb downstream 2404 true Chr2: 106400-108803 Arabidopsis thaliana
AT2G01180 0.5kb downstream 0.5kb downstream 500 false Chr2: 106400-106899 Arabidopsis thaliana
AT2G01180 1.0kb upstream 1.0kb upstream 2904 true Chr2: 106900-109803 Arabidopsis thaliana
AT2G01180 1.0kb upstream 1.0kb upstream 1000 false Chr2: 108804-109803 Arabidopsis thaliana
AT2G01180 1.0kb downstream 1.0kb downstream 2904 true Chr2: 105900-108803 Arabidopsis thaliana
AT2G01180 1.0kb downstream 1.0kb downstream 1000 false Chr2: 105900-106899 Arabidopsis thaliana
AT2G01180 2.0kb upstream 2.0kb upstream 3904 true Chr2: 106900-110803 Arabidopsis thaliana
AT2G01180 2.0kb upstream 2.0kb upstream 2000 false Chr2: 108804-110803 Arabidopsis thaliana
AT2G01180 2.0kb downstream 2.0kb downstream 3904 true Chr2: 104900-108803 Arabidopsis thaliana
AT2G01180 2.0kb downstream 2.0kb downstream 2000 false Chr2: 104900-106899 Arabidopsis thaliana
AT2G01180 5.0kb upstream 5.0kb upstream 6904 true Chr2: 106900-113803 Arabidopsis thaliana
AT2G01180 5.0kb upstream 5.0kb upstream 5000 false Chr2: 108804-113803 Arabidopsis thaliana
AT2G01180 5.0kb downstream 5.0kb downstream 6904 true Chr2: 101900-108803 Arabidopsis thaliana
AT2G01180 5.0kb downstream 5.0kb downstream 5000 false Chr2: 101900-106899 Arabidopsis thaliana
AT2G01180 10.0kb upstream 10.0kb upstream 11904 true Chr2: 106900-118803 Arabidopsis thaliana
AT2G01180 10.0kb upstream 10.0kb upstream 10000 false Chr2: 108804-118803 Arabidopsis thaliana
AT2G01180 10.0kb downstream 10.0kb downstream 11904 true Chr2: 96900-108803 Arabidopsis thaliana
AT2G01180 10.0kb downstream 10.0kb downstream 10000 false Chr2: 96900-106899 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379040 5261 Brassicaceae View MSA
123839517 5264 Brassicales-Malvales View MSA
124322618 5266 SBM View MSA
124248265 5268 Malvidae View MSA
124074068 5270 Rosid View MSA
123752776 5271 Pentapetalae View MSA
122787523 5272 Eudicot View MSA
122042575 5273 Angiosperm View MSA
121350600 5274 Embryophyte View MSA
123428329 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.488        
cufflinks 12.131        
cufflinks 11.07        
cufflinks 14.179       High
cufflinks 7.721       Low
cufflinks 11.449        

0 Strain