Gene : AT2G01480 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31288:SF10 - O-FUCOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  46
Name:  ? AT2G01480 Secondary Identifier:  ? PAC:19638243
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G01480 0.5kb upstream 0.5kb upstream 4768 true Chr2: 216222-220989 Arabidopsis thaliana
AT2G01480 0.5kb upstream 0.5kb upstream 500 false Chr2: 216222-216721 Arabidopsis thaliana
AT2G01480 0.5kb downstream 0.5kb downstream 4768 true Chr2: 216722-221489 Arabidopsis thaliana
AT2G01480 0.5kb downstream 0.5kb downstream 500 false Chr2: 220990-221489 Arabidopsis thaliana
AT2G01480 1.0kb upstream 1.0kb upstream 5268 true Chr2: 215722-220989 Arabidopsis thaliana
AT2G01480 1.0kb upstream 1.0kb upstream 1000 false Chr2: 215722-216721 Arabidopsis thaliana
AT2G01480 1.0kb downstream 1.0kb downstream 5268 true Chr2: 216722-221989 Arabidopsis thaliana
AT2G01480 1.0kb downstream 1.0kb downstream 1000 false Chr2: 220990-221989 Arabidopsis thaliana
AT2G01480 2.0kb upstream 2.0kb upstream 6268 true Chr2: 214722-220989 Arabidopsis thaliana
AT2G01480 2.0kb upstream 2.0kb upstream 2000 false Chr2: 214722-216721 Arabidopsis thaliana
AT2G01480 2.0kb downstream 2.0kb downstream 6268 true Chr2: 216722-222989 Arabidopsis thaliana
AT2G01480 2.0kb downstream 2.0kb downstream 2000 false Chr2: 220990-222989 Arabidopsis thaliana
AT2G01480 5.0kb upstream 5.0kb upstream 9268 true Chr2: 211722-220989 Arabidopsis thaliana
AT2G01480 5.0kb upstream 5.0kb upstream 5000 false Chr2: 211722-216721 Arabidopsis thaliana
AT2G01480 5.0kb downstream 5.0kb downstream 9268 true Chr2: 216722-225989 Arabidopsis thaliana
AT2G01480 5.0kb downstream 5.0kb downstream 5000 false Chr2: 220990-225989 Arabidopsis thaliana
AT2G01480 10.0kb upstream 10.0kb upstream 14268 true Chr2: 206722-220989 Arabidopsis thaliana
AT2G01480 10.0kb upstream 10.0kb upstream 10000 false Chr2: 206722-216721 Arabidopsis thaliana
AT2G01480 10.0kb downstream 10.0kb downstream 14268 true Chr2: 216722-230989 Arabidopsis thaliana
AT2G01480 10.0kb downstream 10.0kb downstream 10000 false Chr2: 220990-230989 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360552 5261 Brassicaceae View MSA
123828485 5264 Brassicales-Malvales View MSA
124341033 5266 SBM View MSA
124243953 5268 Malvidae View MSA
124060500 5270 Rosid View MSA
123747163 5271 Pentapetalae View MSA
122792836 5272 Eudicot View MSA
122049043 5273 Angiosperm View MSA
121350894 5274 Embryophyte View MSA
123381927 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.242        
cufflinks 5.183        
cufflinks 3.037       Low
cufflinks 6.685       High
cufflinks 3.456        
cufflinks 5.254        

0 Strain